Gene Swit_1014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1014 
Symbol 
ID5197380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1129186 
End bp1129995 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content68% 
IMG OID640580560 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001261519 
Protein GI148553937 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.108431 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTGT TCGACGATTA CCAGACGATC CTCTTCAACC GCCGCGGCCG GGTGCTCGAA 
GTCACGCTCA ACCGGCCCGA CAAGCTCAAC GCCACCGACG CGGTGCTGCA TAGCGAGCTG
GCCCGCCTGT TCGTCGACAT CTCGAACGAT CCCGACAGCG ACATCGTCGT GCTGACCGGC
GCGGGCCGGG CCTTCTCGGC CGGCGGCGAC GTCGCCTGGA TGCAGGAGGC GATCGACGAG
CCCGAGCGTT TCGAGCAGAC GGTGCGCGAG GCCAAGCAGA TCGTGTTCGG CCTGATCGAC
TGCGAGAAGC CGGTGATCGC CAAGCTCAAC GGCCATGCCA CCGGGCTGGG CGCCACCATC
GCCCTGTTCT GCGACGTCAT CTTCGCCGCC GACCATGCCA AGATCGGCGA TCCGCACGTC
AGCATCGGCT TCGTCGCGGG CGACGGCGGC GCGGTGATCT GGCCGCAGTT GATCGGCTAT
GCGCGCGCCA AGGAATATCT GCTGACCGGC GACCTGATGA CCGCGACCGA GGCCGCGCGG
ATGGGGCTGA TCAACCATGC CGTGCCCGCC GCCGAGCTCG ACGAGCGGGT CGACGCCTTC
GCCGACCGGC TGGCCAACGG CGCGACCAAG GCGATCCGCT GGACCAAGAT GTCGGTCAAT
ATCGGCCTGC GCGACCTCGC CACCTCGATC ATGGACGCCT CGCTCGCCTA TGAGGCGCTG
TCGAACGTCA CCGCCGACCA TGCCGAGGCG GTCAAGGCCT TCTCCGAGAA GCGGCCCCCG
CTGTTCGGCC GCGCGCGGGG CGGCGCATGA
 
Protein sequence
MSLFDDYQTI LFNRRGRVLE VTLNRPDKLN ATDAVLHSEL ARLFVDISND PDSDIVVLTG 
AGRAFSAGGD VAWMQEAIDE PERFEQTVRE AKQIVFGLID CEKPVIAKLN GHATGLGATI
ALFCDVIFAA DHAKIGDPHV SIGFVAGDGG AVIWPQLIGY ARAKEYLLTG DLMTATEAAR
MGLINHAVPA AELDERVDAF ADRLANGATK AIRWTKMSVN IGLRDLATSI MDASLAYEAL
SNVTADHAEA VKAFSEKRPP LFGRARGGA