Gene Swit_1010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1010 
Symbol 
ID5198314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1124603 
End bp1126132 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content74% 
IMG OID640580556 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001261515 
Protein GI148553933 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0687458 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAA CGCTTGTCCC TGCCGTCGTC AGCGACACCG TCCGGGACGG GATCGCGCTG 
ATCGTCGCCG ATTCCCCGCC GGTCAACGCG CTCGGCTTCG CGGTGCGATC GGGGCTCCAT
GAGGCGCTCG GCCGCGCGAT CGCGGCGGAC GCGGTGGAGG CGATCGTCAT TGCCTGCGAC
GGGCGGACCT TCTTCGCGGG CGCCGACATC GCCGAGTTCG CCGGCCTGAT CCCCGAGCCG
GGGCTCAACA GGATCTACGC GCGGATGGAC GCCTCGCCCA AGCCGATCGT CGCGGCGATC
CACGGCACCG CGCTGGGCGG CGGGCTCGAA CTCGCGCTGG CCTGCCACTA CCGCGTCGCC
GCCGCCGATG CGAAGCTCGG CCTGCCCGAG GTGCAACTCG GCCTGTTGCC GGGGGCGGGC
GGCACGCAGC GGACGCCGCG CCTGATCGGC GTCGCCGCCG CGCTCGAGCT GATGATCTCG
GGCCAGCCCG TCGACGCCGC CCGCGCGAAG GCGATCGGGC TGGTCGACGA CGTGGCCGGG
GGCGACCTGC GCGAGGCCGC GATCGCGCTG GCGCGTCGGG TGACGGCGGA GGGCACGCCG
CGGCGGACGC GCGACCGGTC CCCGGACGTG ACCGGAGATG CGGCCGAGGC GCTGTTCGCC
CGCTTCCGCG CCGATCATGA AGCGGTCTTC ACCGGCTTCA AGGCACCGGG CCATATCCTG
CGCGCGATCG AGGCGTCGAC CCGGCTGCCG TTCGACGAGG GACGCGCCGT CGAGCAGGCG
CTGTTCGAGG AGCTGATGGA GAGCCATGAA TCGCTCGCCC AGCGCCACAT CTTCTTCGCC
GAGCGCGCCG CCGCGAAGGT CCCGGGACTG GGCCGCGATG TCCGCCCGCT GGCGAATCCG
TCGGTCGCGG TGCTGGGGGA GGACGAAAGG GCCGATGCGC TGCGCAACGC CCTTGCCCTT
CCTTCGGCGC CGGAGGGCGA AGCCGATCTG ATCGTGATCG CCGATCCGGC CATCGAGGTC
GATGCCGTCG CCGCGCGGGC GGCGCGGCCG GAGGCGGTGG TCGCGCTGCA CCTGCCGATC
GAGGTCGCGG GCAATCGCCT GCTGGAGATC GGGCGCGGGA CGCGGACGAG CGACGTCGCG
CTCGCCACGG CGCTGGCGCT GGCGCGACGG CTCGGCCGGG CGCCGGTGGT GTCGGCCGGC
ACGGCCGGCC TGATCGGGAC CCGCGTGCTC GCGGCGGGCC GTGTGGCGGC CGAGGCGTTG
GTAGGCGAAG GCATTTCGGC ATCGGCGATC GACCGGGCGA TGACCGGCTA TGGCTTCCCA
TCGGGCCTGT TCGGCCCGGC CGTGGGCGAG GCCGTCGATG ACGCCGCGAT CGTCCGGCGG
CTGCTCGCCG CGATGGTCGA GGAGAGCGCG CGGATCGTCG AGCAGGGCGT CGCGCCGCGC
GCCTCGGACG TCGATGTCGC GATGGTGCTC GGCTTCGGCT GGCCCGCCTG GCGGGGCGGG
CCGCTGTTCC GGGCCGAGCG CGCGACCTGA
 
Protein sequence
MAETLVPAVV SDTVRDGIAL IVADSPPVNA LGFAVRSGLH EALGRAIAAD AVEAIVIACD 
GRTFFAGADI AEFAGLIPEP GLNRIYARMD ASPKPIVAAI HGTALGGGLE LALACHYRVA
AADAKLGLPE VQLGLLPGAG GTQRTPRLIG VAAALELMIS GQPVDAARAK AIGLVDDVAG
GDLREAAIAL ARRVTAEGTP RRTRDRSPDV TGDAAEALFA RFRADHEAVF TGFKAPGHIL
RAIEASTRLP FDEGRAVEQA LFEELMESHE SLAQRHIFFA ERAAAKVPGL GRDVRPLANP
SVAVLGEDER ADALRNALAL PSAPEGEADL IVIADPAIEV DAVAARAARP EAVVALHLPI
EVAGNRLLEI GRGTRTSDVA LATALALARR LGRAPVVSAG TAGLIGTRVL AAGRVAAEAL
VGEGISASAI DRAMTGYGFP SGLFGPAVGE AVDDAAIVRR LLAAMVEESA RIVEQGVAPR
ASDVDVAMVL GFGWPAWRGG PLFRAERAT