Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1002 |
Symbol | |
ID | 5196964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 1116383 |
End bp | 1116985 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640580548 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_001261507 |
Protein GI | 148553925 |
COG category | [R] General function prediction only |
COG ID | [COG2910] Putative NADH-flavin reductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0517555 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGATCG CGATCATCGG CGCCACCGGC AATGTCGGCC GGCGGCTCGT CGACGAACTC GAACGGCGCG GGCACGAGGT GACGGGCATC GCCCGGTCGC GGCCCGCCGA CGACCCCGGC GTGCCGCTGC GGCTGGCCGA CGCCAATGAT CCGGCGGCGC TGGCGACGGC GATCGCCGGG CAGGACGCGG TGATGCTGGC GGGGCGCTTC GTCTCGACCA ATGCCGATGC GATCGTCGCG GCGGTGAAGC GCGCCGGCGT GCCCCGGCTG CTGGTCGTCG GCGGCGCGGG CACATTGTTC GCGACGCCGG GCGTGCAGTT GATCGACATG GGGGTGATCC CCGAGGCCTT CCTGCCCGAA GTGTCGGCGG GCCGCGATTT CCTGGAGGGG CTCAAGCGCA GCGACGTCGA CTGGACCTTC CTATCGCCCG CGGCCAGTTT CGTCCCCGGC GAGCGCACCG GCCGCTACCG GCTGGGCGGC GACGATCTGA TGCGCGACGC GTCGGGCGAC AGCCGCATCT CCTATGAGGA CCTGGCGATG GCGCTGGTCG ACGAGTTGGA GCAGCCGCGG CACAGCCGGC GGCGTTTCTC GATCGCCTAT TGA
|
Protein sequence | MKIAIIGATG NVGRRLVDEL ERRGHEVTGI ARSRPADDPG VPLRLADAND PAALATAIAG QDAVMLAGRF VSTNADAIVA AVKRAGVPRL LVVGGAGTLF ATPGVQLIDM GVIPEAFLPE VSAGRDFLEG LKRSDVDWTF LSPAASFVPG ERTGRYRLGG DDLMRDASGD SRISYEDLAM ALVDELEQPR HSRRRFSIAY
|
| |