Gene Swit_1002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1002 
Symbol 
ID5196964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1116383 
End bp1116985 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content72% 
IMG OID640580548 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_001261507 
Protein GI148553925 
COG category[R] General function prediction only 
COG ID[COG2910] Putative NADH-flavin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0517555 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCG CGATCATCGG CGCCACCGGC AATGTCGGCC GGCGGCTCGT CGACGAACTC 
GAACGGCGCG GGCACGAGGT GACGGGCATC GCCCGGTCGC GGCCCGCCGA CGACCCCGGC
GTGCCGCTGC GGCTGGCCGA CGCCAATGAT CCGGCGGCGC TGGCGACGGC GATCGCCGGG
CAGGACGCGG TGATGCTGGC GGGGCGCTTC GTCTCGACCA ATGCCGATGC GATCGTCGCG
GCGGTGAAGC GCGCCGGCGT GCCCCGGCTG CTGGTCGTCG GCGGCGCGGG CACATTGTTC
GCGACGCCGG GCGTGCAGTT GATCGACATG GGGGTGATCC CCGAGGCCTT CCTGCCCGAA
GTGTCGGCGG GCCGCGATTT CCTGGAGGGG CTCAAGCGCA GCGACGTCGA CTGGACCTTC
CTATCGCCCG CGGCCAGTTT CGTCCCCGGC GAGCGCACCG GCCGCTACCG GCTGGGCGGC
GACGATCTGA TGCGCGACGC GTCGGGCGAC AGCCGCATCT CCTATGAGGA CCTGGCGATG
GCGCTGGTCG ACGAGTTGGA GCAGCCGCGG CACAGCCGGC GGCGTTTCTC GATCGCCTAT
TGA
 
Protein sequence
MKIAIIGATG NVGRRLVDEL ERRGHEVTGI ARSRPADDPG VPLRLADAND PAALATAIAG 
QDAVMLAGRF VSTNADAIVA AVKRAGVPRL LVVGGAGTLF ATPGVQLIDM GVIPEAFLPE
VSAGRDFLEG LKRSDVDWTF LSPAASFVPG ERTGRYRLGG DDLMRDASGD SRISYEDLAM
ALVDELEQPR HSRRRFSIAY