| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0999 |
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| Symbol | |
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| ID | 5200205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1110218 |
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| End bp | 1112386 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640580545 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001261504 |
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| Protein GI | 148553922 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.285089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.123899 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACTC ATGCACTATT GCTGGCGGGT GTCGCTCTCG GGACCTGCAT CGCGATGCCG
GCCTTTGCGC AGGCCGCGCC CGATGCCGAC ACGGATACGG GCCTGCAGGA CATCGTCGTC
ACCGCGCAGC GCCAGTCGCA GTCGCTGCAG CGCGTCCCGA TCGCGGTGAC CGCGGTGACG
GCCGGCGACC TCGCGTCGCG GCAGATCACC AACACGCTCA ACCTCGAATC GGCGGTGCCG
AACCTGACCC TGACCCAGAA CGGCGTGTCG GTGACGCCGT TCCTGCGCGG CGTCGGATCG
AACCAGTCCA ACCCGAACGA CGAGGCGTCG GTCGCGACCT ATATCGACGG CGTCTACATC
CCGTCGGTGA CCGGCAACAT CTTCAAGTTC AACAATGTCG AGCGGATCGA GGTGCTGAAG
GGGCCGCAGG GCACGCTGTT CGGCCGCAAC GCCACCGGCG GCGTCATCCA GATCGTCACC
CGCGATCCCG ACATCGACGC GCCGCTGCTC GACGTCAGCA TCGGCGCCGG CAAATACGGC
ACGATCGAGG CCAATGGCTA TGCCTCGACC GGGCTGGGCG AGAAGGCCGC GATCGACCTG
GCGGTCAGCT TCGACCGCAA CGACGGCTAT GGCAAGGACA TCAACCGCAA CGCCGACATC
TTCAAGCACA ACCAGCTCGG CCTGCGCTCC AAGCTGCTGT TCAAGCCGGG CGAGAACACC
GAGATCCGGC TGACCGCCGA CTATAGCCGG CTCAATTCGA CCGGCACCGA CTATCAGCTC
CGCCAGGGCG TGATCGGCGC CGACGGCGTC ACCAGCTATC CCGGCAAGCG CCGCACCAAC
ACCGACTGGA AGAACACCGG CGACAACGAC ATCTACGGCG CGTCGCTGCG CATCGACCAG
GACATGGGCT TCGCGCGGCT CGCCAGCATC ACCGGCTATC GCCACGTCAA GGGCGACTTC
CACCTCGACC AGGACGCGAC GCCGACGCCG ATCGTCCAGG CCGACATCAA CCAGTTCGCC
GAGAGCTATT CGCAGGAGCT CCAGCTCCTC GCGCCGACGG ATTCGAAGAT CGACTGGCTG
GTCGGCGGTT ATTATTTCCA CGCCAAATAT GCCTATACGC CGCTCCGCCT CGGCGGCCTC
GCGGCGGCAC CGCTGCCCGC GATCGACCTG TTCGGCGATC AGAAGACCAA GTCGCTGTCG
ATCTACGGCC AGGCGACCGT GCCGGTCACC GCGACGACCA AGATCACCGG CGGCCTGCGC
TACACCTATG AGAAGCAGGA TACGGACGGC CGCACCGAGA GCGGCGGCGT CGTCTTCCCG
CACGCGCCCA ACGCGCTCTG CCCGGGGGCG ACCACCGACT GCCCGCAGTC GCAGGACATC
AAGAAGCTGA CCTGGCGCGT CTCGATCGAC CAGGAACTGG GCGACGGCGT GCTCGGCTAT
CTCTCCTACA ACCGCGGCAT CAAGAGCGGC GGCTTCAACA TGATCAACGC CGGCACCCCC
GGCTACAAGC CCGAGATCCT CGACGCCTAT GAGGCGGGGC TGAAGATGCA GCTGTTCGAC
CGCAGGGTGC GCCTGAACGC CGCCGCCTTC ATCTACGACT ATCAGGACAT CCAGGTGTTC
AACATCACCG GCGGCGGCGC GGTGCTGACC ACCAACGCGG CGGCGGCGCG GGTCCACGGC
TTCGACGCCG ACATCGCGAT CAAGGCGACG TCGAACCTGA CGCTGAGCGG CGGCTTCGGC
TGGCTCGACG GCAAGTATAC CGACTTCCCC AACGCGACCT ACACGCCGCC GTCGCCGCTG
ATGGGGCCGC AGGTGCCGAT CGACGCCACC GGCAACCGCA TGATCTACGC GCCAAAATAT
AGCGGCAATG TCACCGTCGA CTATCGCATG CCGACCAGCG TCGGCGAGTT CGGGGTCAAC
GTCTCGGCGG CGGTGCGCAG CCGGGTGTTC GTGACGGCGG CCAACCGGCT GGCGATCCCG
GGCTACACGG TGGTCAACTC GACGCTGAGC TGGACCTCGC AGGACCAGCG CTTCGGCGCG
CAATTCTGGG TCCGCAACCT GTTCGACAAG GATTATTACC TGAACCGCAC CGAGCAGGCG
CTCGGCGACA TCCAGTTCCT GGCGCCGCCG CGCACGATCG GCGTGACGCT CAGCTTCAAG
AGCCGCTAA
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| Protein sequence | MKTHALLLAG VALGTCIAMP AFAQAAPDAD TDTGLQDIVV TAQRQSQSLQ RVPIAVTAVT
AGDLASRQIT NTLNLESAVP NLTLTQNGVS VTPFLRGVGS NQSNPNDEAS VATYIDGVYI
PSVTGNIFKF NNVERIEVLK GPQGTLFGRN ATGGVIQIVT RDPDIDAPLL DVSIGAGKYG
TIEANGYAST GLGEKAAIDL AVSFDRNDGY GKDINRNADI FKHNQLGLRS KLLFKPGENT
EIRLTADYSR LNSTGTDYQL RQGVIGADGV TSYPGKRRTN TDWKNTGDND IYGASLRIDQ
DMGFARLASI TGYRHVKGDF HLDQDATPTP IVQADINQFA ESYSQELQLL APTDSKIDWL
VGGYYFHAKY AYTPLRLGGL AAAPLPAIDL FGDQKTKSLS IYGQATVPVT ATTKITGGLR
YTYEKQDTDG RTESGGVVFP HAPNALCPGA TTDCPQSQDI KKLTWRVSID QELGDGVLGY
LSYNRGIKSG GFNMINAGTP GYKPEILDAY EAGLKMQLFD RRVRLNAAAF IYDYQDIQVF
NITGGGAVLT TNAAAARVHG FDADIAIKAT SNLTLSGGFG WLDGKYTDFP NATYTPPSPL
MGPQVPIDAT GNRMIYAPKY SGNVTVDYRM PTSVGEFGVN VSAAVRSRVF VTAANRLAIP
GYTVVNSTLS WTSQDQRFGA QFWVRNLFDK DYYLNRTEQA LGDIQFLAPP RTIGVTLSFK
SR
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