Gene Swit_0997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0997 
Symbol 
ID5200203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1108656 
End bp1109858 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content67% 
IMG OID640580543 
Productcytochrome P450 
Protein accessionYP_001261502 
Protein GI148553920 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2124] Cytochrome P450 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.148456 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.290105 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGACA GGAATTTCAC CCAGGCCGAC TACAACCATC ACGATCCGAA GATCGCCCAG 
GACCCCTATG GCTTCCTGGC GAAGGTGCGC GGCGGCCAAT GTCCGCTCGG CCATTCGGAC
GAGCTGGGCG GCTTCTATTT TCCGACCACC TATGACGGGG TGAAGCGGGT CTTCTCCGAC
TATCGCACCT TCACCTCGAA CGAGGGGGCG GGGCTTCCCG CGCAGCTCGT CCGCTTCTTC
CCGGTCGATC TCGATCCGCC GAACCACACC CGCTGGCGGC GCACGCTCAA CCGCTTCTTC
ACCCAGGAGG CGGCGGAGGC CGACCGGCCC CGCATCCAGG GGCTGGCCGA CAAGCTGATC
GATGCTTTCG TCGAGCGCGG CAGCGCCGAC CTGGTCAACG AATTCACCCG GCCCTTCCTG
GCGATGACGA TGCTGCCGGT GATCGGCTGC CCCGACGACG ACCGGCCGAT GTTGTCCGAA
AAGCTGATGT GGATGGTCCA CAACCGGCTG CTCGACCATG ACGGCTGGGT CCGGCGCTAT
ACCGAGATCG GCGATTACCT GATGGGCCTC GCCGCCGCGC GCCGGGTGGC GCCGCGTCGG
GACGACCTGC TTCAATGCCT GATCGAGGAG GAGTTCGACG GCAAGCGGCT CAGCGACATG
GAGGTGTACC AGGTCCTGAT CCTGGCGCTG TTCGGCGCGC TCGATTCGAC CAGCTCGGCG
ATGAGCGGAT CGCTGTTCCA CCTCGGCCAG CATCCCGAGG ACAAGCGGCG GCTGCTGTCG
GGCGAGGTGG CGTGGCCGGT CGCGATCGAG GAGTTCCTGC GCTTCACCAC CCCAATCCAG
ACGCTGCGCC GCACCGTCGT GCAGGAGACC GAGCTCGACG GCGGCGCGCT CCATCCGGGC
GACATCGTGC TGTGCATCAA CGGCGCGGCC AATCGTGATC CCGACAAGTT CGTCGATCCC
GACCGCTGCA TCATCGACCG CGACGCGCGC GACCATATGT CGTTCGGATC GGGCGCGCAT
GTCTGTATCG GCCGCCATTA TGCGCGGGTG ATGATCGACA CCTGCCTGAA GACGATGCTG
GGCCGGATCG GCGACTATCG GATCGCGCCC GGCTTCACGC CCGACTACAC CTCGAGCGAG
GCGCGCGCGC TCAAGACGCT GATGGTGGAG TTCACGCCCG GCCCGCGCCT GTTGGCCGGC
TGA
 
Protein sequence
MPDRNFTQAD YNHHDPKIAQ DPYGFLAKVR GGQCPLGHSD ELGGFYFPTT YDGVKRVFSD 
YRTFTSNEGA GLPAQLVRFF PVDLDPPNHT RWRRTLNRFF TQEAAEADRP RIQGLADKLI
DAFVERGSAD LVNEFTRPFL AMTMLPVIGC PDDDRPMLSE KLMWMVHNRL LDHDGWVRRY
TEIGDYLMGL AAARRVAPRR DDLLQCLIEE EFDGKRLSDM EVYQVLILAL FGALDSTSSA
MSGSLFHLGQ HPEDKRRLLS GEVAWPVAIE EFLRFTTPIQ TLRRTVVQET ELDGGALHPG
DIVLCINGAA NRDPDKFVDP DRCIIDRDAR DHMSFGSGAH VCIGRHYARV MIDTCLKTML
GRIGDYRIAP GFTPDYTSSE ARALKTLMVE FTPGPRLLAG