| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0991 |
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| Symbol | |
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| ID | 5199736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1102525 |
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| End bp | 1104018 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640580537 |
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| Product | D-lactate dehydrogenase (cytochrome) |
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| Protein accession | YP_001261496 |
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| Protein GI | 148553914 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0782856 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.327269 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTTGA GGATGCCGAC ACCGGACGAG GCCGTGCTTG CCCGCCGCGC GGAGATCGTC
GCGGCGCTGC GGGCGATCGT GCCCGGCGAA GGCGTGATCG ACGATGCCGA CGAGCTTCGC
CCCTATGAGA GCGACGGGCT GACCGCCTAT CGCCAGCCGC CGATGGTCGT CGTCCTGCCC
GAGACGGTCG ATCAGGTCGC GGCGGTGCTG CGCTGGTGCC ATGCCAACGG CGTCCGCGTC
GTGCCGCGCG GCGCGGGCAC GTCGCTCTCG GGCGGGGCGC TGCCGCTGGC CGACGCGGTG
CTGCTCGGCA TGGCGCGCTT CAACCGCATC CTCGCCATCG ACTATGCCGA CCGCATCGCG
GTGGTCCAGC CCGGCGTCAC CAACCTCGCC ATCACCCGCG CGGTCGAGGA GGAGGGCTTC
TACTACGCCC CCGACCCGTC GAGCCAGATC GCCTGCACGA TCGGCGGCAA CGTCGCCGAG
AATTCGGGCG GGGTGCATTG CCTGAAATAT GGGCTGACCA CCAACAACGT CCTCGGCGTC
GAGCTGGTGA CGATCGAGGG CGAGGTGCTG CGCCTCGGCG GCCGCCACCT CGACCCGGCC
GGGCTCGACC TGCTCGGCGT CGTCGTCGGG TCGGAAGGGC TGCTCGGCGT CGTCACCGAG
GTGACCGTCC GCATCCTGCC CCGGCCCGAG ACCGCGCGCG CCGCGCTGAT CGGCTTCCCG
ACCGTAGAGA GCGCCGGCCA GTGCGTCGCC GACGTCATCG CCGCCGGCAT CATCCCGGCG
GGGATGGAGA TGATGGACCG CCCCGCCATC CACGCCGCCG AGGCGTTCGT GCAGGTCGGC
TATCCGCTCG ACGTCGAGGC GCTGCTGATC GTCGAGATGG ACGGCCCCGC CGCCGAATGC
GACCATCTGG TCGACGAGGT GGCGCGGATC GCCGACGCCA ACGGCGCGGT GTCGCTGCGC
GTCTCCAACG ACGATGCCGA GCGGCTGGCC TTCTGGGCGG GGCGCAAGGC CGCCTTCCCC
GCCGTCGGCC GGATCGCGCC CGATTATTAT TGCATGGACG GCACCATCCC GCGCCGCCGC
CTGCCCGAGG TGCTGCGCCG CATGTCCGAG CTGGCCGCGC ATCACGGGCT GGGCGTCGCC
AACGTCTTCC ATGCCGGCGA CGGCAATCTC CACCCGCTGA TCCTCTACGA TGCGCACAAG
CCCGGCGACC TCGAGCGGGC CGAGGAATTC GGCAACGACA TATTGCGCCT CTGCGTCGAG
GTCGGCGGGG TGCTGACCGG CGAGCATGGC GTCGGCGTCG AGAAGCGCGA CCTGATGCCC
GAGATGTTCA GCGACATCGA CCTGAAGCAG CAGCAGCGCG TCAAATGCGC CTTCGATCCG
GCCTCGCTGC TCAATCCGGG CAAGGTCTTC CCGACGCTGC ACCGCTGCGC CGAGCTGGGA
CGGATGCACG TCCATGGCGG CGCGCTGCCC TTTCCCGATC TTCCGCGCTT CTGA
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| Protein sequence | MTLRMPTPDE AVLARRAEIV AALRAIVPGE GVIDDADELR PYESDGLTAY RQPPMVVVLP
ETVDQVAAVL RWCHANGVRV VPRGAGTSLS GGALPLADAV LLGMARFNRI LAIDYADRIA
VVQPGVTNLA ITRAVEEEGF YYAPDPSSQI ACTIGGNVAE NSGGVHCLKY GLTTNNVLGV
ELVTIEGEVL RLGGRHLDPA GLDLLGVVVG SEGLLGVVTE VTVRILPRPE TARAALIGFP
TVESAGQCVA DVIAAGIIPA GMEMMDRPAI HAAEAFVQVG YPLDVEALLI VEMDGPAAEC
DHLVDEVARI ADANGAVSLR VSNDDAERLA FWAGRKAAFP AVGRIAPDYY CMDGTIPRRR
LPEVLRRMSE LAAHHGLGVA NVFHAGDGNL HPLILYDAHK PGDLERAEEF GNDILRLCVE
VGGVLTGEHG VGVEKRDLMP EMFSDIDLKQ QQRVKCAFDP ASLLNPGKVF PTLHRCAELG
RMHVHGGALP FPDLPRF
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