Gene Swit_0983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0983 
Symbol 
ID5196425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1092611 
End bp1093861 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content68% 
IMG OID640580529 
ProductFkbM family methyltransferase 
Protein accessionYP_001261488 
Protein GI148553906 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2519] tRNA(1-methyladenosine) methyltransferase and related methyltransferases 
TIGRFAM ID[TIGR01444] methyltransferase, FkbM family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.171365 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGAAC GACAGGTGAC GCTCTTGACC CATGACCACG ACCTGGCCCT GGGCCGCCCC 
GCCGAGCAGA GTTCGGCCTG CCATTGGTCG GCGGCCGGAT CGACCCGCGA GGATGCCGCC
TTCGTCGTCG AGGGCATCAT CGACCGGACC GATCGCGAAT ATGCCAACCA CACCGCCGAG
GAGCTGTTCC CCTGGTGGCA GGTCGATCTC GGCGCGGCCT ACCGGATCGA CATGGTTCGG
CTGTTCAACC GGCGCAGCCA TGCCGAGCGC CTTTCCCGCT TTACCATCCT CGGCTCGGTC
GACCAGGCGA ACTGGACGGC GATCCACCGC CATGACGGCC AGCCGGTGCT GGGGGCCGGC
GACGAGGGCG CGGCGATCGC GATCGATCGC CCCAATCTGG CCCGCTATGT CCGGGTGCGG
CTGGACGGTT TCGCGCCGCT GCACCTGCGC GCGGTCCAGG TCTTCGGGCA TCTTCCCGAC
GAGAAGGACG CCGACGCCCT GGCTGCGTTC GTCGCCCGGC TTGCCGCCGA GCGCGACGCC
GTCGTGGCCG GGCGCACCGG AAGGATGCTG AAGATCGGCA ATCTTCAGAT ATTCGCCGAC
GAGGAGCGCT ACAGCCCGCC GATCATCCGG TCGCTGGAGG ATGGCGGCTA TGAGGGGCCG
GAGCGCAGCA TCCTCTACGC CGCGCTCCGC TCGCAGGATC GCGTGCTGGA GATCGGGACC
GCGGTGGGCG TCCTGTCGAT GACCGCCGCG TCGATCGTCG GTCCGGAGAG CGTCGCCACC
TACGAAGCCA ATCCCTATAT CCTGGAGGAT GCCCGCCGGA ACTTCGCCGC CAACGGCTTC
GGCGCGATCC GCTCCACCAA TGCCGTGTTG CAGGCGCGGG CGAAGATGGC GGAGGTGCCG
CCGACCATGC CCTTCGCCCT GTCGCGGGAT TTCTGGGCGT CCCGGCTGGG CGCCACGATC
GGCGACCCGG ACATCGTCGA GGTCGTCGAC ATCCCGACCG CCAGCCTCGA GGATGCGATC
GAGGCGCATC GCGCCAATGT CCTGGTCTGC GACATCGAAG GCGGCGAGGC CGACCTGCTG
CTGGAGGCGG ACCTGAGCGC GATCGACACG ATCGTCATCG AAACCCATTA TTGGGCGGCC
GGGCGGCGGG CCATTTCCGA CCTGATCCGC AAGTTCGTCT CCGACGGCTT CGATCTCGAC
CTCGACCTGA GCGCGCATCA TGTGAGCTGT TTCCGCCGGG GGCTTTCCTG A
 
Protein sequence
MMERQVTLLT HDHDLALGRP AEQSSACHWS AAGSTREDAA FVVEGIIDRT DREYANHTAE 
ELFPWWQVDL GAAYRIDMVR LFNRRSHAER LSRFTILGSV DQANWTAIHR HDGQPVLGAG
DEGAAIAIDR PNLARYVRVR LDGFAPLHLR AVQVFGHLPD EKDADALAAF VARLAAERDA
VVAGRTGRML KIGNLQIFAD EERYSPPIIR SLEDGGYEGP ERSILYAALR SQDRVLEIGT
AVGVLSMTAA SIVGPESVAT YEANPYILED ARRNFAANGF GAIRSTNAVL QARAKMAEVP
PTMPFALSRD FWASRLGATI GDPDIVEVVD IPTASLEDAI EAHRANVLVC DIEGGEADLL
LEADLSAIDT IVIETHYWAA GRRAISDLIR KFVSDGFDLD LDLSAHHVSC FRRGLS