Gene Swit_0978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0978 
Symbol 
ID5197260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1086159 
End bp1086947 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content72% 
IMG OID640580524 
Product3-oxoadipate enol-lactonase 
Protein accessionYP_001261483 
Protein GI148553901 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID[TIGR02427] 3-oxoadipate enol-lactonase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACC AGGGATTCGC CAGCGTTGGC GACGGCTGCC GCATCGCCTG GCGGCTCGAC 
GGGCCCGCGG ATGCCCCCGT GCTGATGCTC TCCAACTCGC TGGGCACCAC GATGGACATG
TGGCTGCCGC AGCTTCCCGT GCTGACGGAA CGCTTCCGCG TGCTGCGCTA CGACCAGCGC
GGCCATGGCG CCTCGGACGC GCCGGCCGGC GGCTACAGCC TCGACCGGCT GGGCCGCGAC
GCGGTCGAGC TGCTCGACGC GCTGGGGCTG GAGACGGTCG ACTATTGCGG CCTGTCGCTC
GGCGGCATGA CCGGCCAATG GCTGGGCGTC CACGCGCCCG ATCGCTTCCG GCGCATCGTC
CTCGCCAACA CGGCCGCCTA TATGGGCCCG CCCTCGGGCT GGCAGGCGCG GATCGGCGTG
GTGCTCGACA AGGGCATGGC GGCGATCGCC TCTGCGGTGC TCGAACGCTG GTTCACGCCC
GAATTCCTGC CCGGATCGCC CGAGGTGAAG GCGACGGTCG AGGCCTGGCT GCTCGCCACC
AGCCCGGTCG GCTATGCCGG CTGCTGCGCC GCGATCCGCG ACATGGACCT GCGCCCCGTC
ATCGGCCTGA TCCGCACGCC GACGCTGGTG ATCATCGGCG GCCGCGACCC CGCCACCCCG
CCCGCCCAGG GCGAGGAGAT CGTCGCCGCG ATCCCGGGCG CCAGGGGCGT GACCTTCGAC
GCCGCGCATC TGTCCAATAT CGAGCAGCCG GAGAAATTCG CGGCGGCCCT GCTGGACTTC
CTCGCCTGA
 
Protein sequence
MTDQGFASVG DGCRIAWRLD GPADAPVLML SNSLGTTMDM WLPQLPVLTE RFRVLRYDQR 
GHGASDAPAG GYSLDRLGRD AVELLDALGL ETVDYCGLSL GGMTGQWLGV HAPDRFRRIV
LANTAAYMGP PSGWQARIGV VLDKGMAAIA SAVLERWFTP EFLPGSPEVK ATVEAWLLAT
SPVGYAGCCA AIRDMDLRPV IGLIRTPTLV IIGGRDPATP PAQGEEIVAA IPGARGVTFD
AAHLSNIEQP EKFAAALLDF LA