| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0977 |
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| Symbol | |
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| ID | 5197259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1085033 |
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| End bp | 1085965 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640580523 |
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| Product | catechol 1,2-dioxygenase |
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| Protein accession | YP_001261482 |
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| Protein GI | 148553900 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02439] catechol 1,2-dioxygenase, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.705538 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCCG AACTGGTGCA AAGCCCTGAA ATCCAAGCCT ATCTCGATCG CATTTCCGGC
CTCGACCAGG AAGGCGGCGA TCGGCGCATG AAGCAGATCC TCCGCCGCGT CGTGTCGGAC
CTGTTCACCA CGATCGATGA TTTCGACGTG AGCGCCGAGG AGTTCTGGGC CGCGCTGCAC
TTCATGCAGC AGGGCGCGCC CGAGTTCGGC CTGATCGCGC CGGGCCTCGG CTTCGACCAT
TTCCTCGACG TCCGCATGGA CCTCGCCGAC AAGAAGGCCG GCACCACCGG CGGCACCCCG
CGCACCATCG AGGGCCCGCT CTACATCCCC GGCGCCCCGA TCGAGAAGGG CCGCGCCCGC
CTCGACGATG GCGAGGACAC CGGCGAGGTG CTGGTCATGC GCGGCACCGT CAAGGACCTG
AACGGCAAGC CGGTCGCCGG CGCGATCGTC GACGTCTGGC ACGCCAACAC CAAGGGCGGC
TATTCAGGCT TCGACCCGTC GCAGAAGCCC TATAACAACC GCCGCCGCAT CGAGACCGGG
GCCGACGGCA GCTATGTCTT CCGCAGCGTC GTCCCCTCGG GCTATTCGGT TCCGCCGCAG
GGCAGCACCG ATCGCCTGCT CCAGTCGGTC GGCCGCCATG GCAACCGTCC GGCGCACATC
CACTTCTTCG TGTCGGCGCC GGGCTATCGC CATCTGACCA CCCAGATCAA CATCGACGGC
GATCCCTATC TGCACGACGA CTTCGCCTTC GCGACCCACA ACGACCTGAT CCCCGAGGTC
GTCCGCCAGG AGGACCCGGA GCAGATCCGC GCCGAGCAGC TCAACGGGCC GTTCAGCCAA
ATCGACTTCG ACTTCACCCT GCAGAAGGCG GCCGACGCGG CCGAAGCCGA GCTGATGGCC
CGCAGCCGGG CTCCGGCGCC CGCCGGCGCC TGA
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| Protein sequence | MASELVQSPE IQAYLDRISG LDQEGGDRRM KQILRRVVSD LFTTIDDFDV SAEEFWAALH
FMQQGAPEFG LIAPGLGFDH FLDVRMDLAD KKAGTTGGTP RTIEGPLYIP GAPIEKGRAR
LDDGEDTGEV LVMRGTVKDL NGKPVAGAIV DVWHANTKGG YSGFDPSQKP YNNRRRIETG
ADGSYVFRSV VPSGYSVPPQ GSTDRLLQSV GRHGNRPAHI HFFVSAPGYR HLTTQINIDG
DPYLHDDFAF ATHNDLIPEV VRQEDPEQIR AEQLNGPFSQ IDFDFTLQKA ADAAEAELMA
RSRAPAPAGA
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