| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0975 |
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| Symbol | |
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| ID | 5197480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1083525 |
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| End bp | 1084712 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640580521 |
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| Product | muconate cycloisomerase |
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| Protein accession | YP_001261480 |
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| Protein GI | 148553898 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | [TIGR02534] muconate and chloromuconate cycloisomerases |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.995567 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGCGAA CCATAAGAGA GAGCATGCCC TTCAAGGTCG AGAAGATTGA TACCTGGATC
GTCGATATAC CGACGATTCG GCCGCATGTC CTGTCCATGA TCGCGATCAA CAAGCAGGTC
ATGGTGATCG TGCGCGTCCA TTGCTCCGAC GGAATCGTCG GAATGGGCGA AGGCACGACA
ATCGGCGGGC TCAGCTATGG GGACGAGAGC CCCGAGGGCA TGAAGCTGAC GATCGACGAA
TATATGGCGC CGCTGCTGAT CGGTCGCGAG GCGACGAACA CCGCGTCGCT GATGGCGCTG
GTCCGCCAAT ATGTCGTCGG CAACCATTTC GCCAAGAACG CGGTCGAGAC CGCGCTGCTC
GACGCCGAGG CGCAGCGCGC CGGCGTGCCG CTCAGCGAGC TGCTCGGCGG CCGGCTGCGC
GATCGCCTGC CGGTGCTGTG GACGCTCGCC AGCGGCGACA CCGGCCGCGA CATCGAGGAA
GCCGAGGAGA TGCTGGCGCA GCGCCGCCAC GACGTCTTCA AGCTCAAGAT CGGCAAGCGC
GCCCTGGCCG ACGACGTCGC CCATGTCGCC GCGATCAAGC GGGCGATGGG CGACCGCGCC
TCGGTGCGGG TCGACGTCAA CCAGGCCTGG GACGAGCCGA CCGCGCGCCG CGGCGCGCAT
ATGCTCGCCG ACGCCGGGGT CGACCTGATC GAACAGCCGC TGCCGCGCGC CGACCGCGAG
GGGATGCGCC GGCTGACCGC CTATTCGCCG ATCGCGATCA TGGCCGACGA GGCGCTGCGC
GGTCCGTCCG ACGCGCTCGA CTTCGCGCGC AACCGGGGCG CCGACGCCTT CTCGATCAAG
CCGCCCCAGG CCGGCGGCCT GTTCGCGGGC GGGCAGCTCG CGGCGATCGC CGAGGCCGGG
CATATCGGCG TCTATGGCGG CACGATGCTC GAAGGCAGCG TCGGCACCAT CGCCTGCGCC
CATCTCTACG CGACCTTCGC CAAGCTCGAA TGGGGAACCG AGCTGTTCGG TCCGCTGCTC
CAGACCGAGG AGATACTGAC CGAGCCGCTC GCCTTCCGCG AGTTCGGCCT CGATCTTCCC
ATCGGGCCCG GCCTGGGCGT TGCGCTCGAC ATGGACAAGG TCCACCATTT CCGCCGCGAC
GGGCCCAGCC GGACCGTCGT CGGCCAGCCG ATCGAGGAGT CCGCCTGA
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| Protein sequence | MKRTIRESMP FKVEKIDTWI VDIPTIRPHV LSMIAINKQV MVIVRVHCSD GIVGMGEGTT
IGGLSYGDES PEGMKLTIDE YMAPLLIGRE ATNTASLMAL VRQYVVGNHF AKNAVETALL
DAEAQRAGVP LSELLGGRLR DRLPVLWTLA SGDTGRDIEE AEEMLAQRRH DVFKLKIGKR
ALADDVAHVA AIKRAMGDRA SVRVDVNQAW DEPTARRGAH MLADAGVDLI EQPLPRADRE
GMRRLTAYSP IAIMADEALR GPSDALDFAR NRGADAFSIK PPQAGGLFAG GQLAAIAEAG
HIGVYGGTML EGSVGTIACA HLYATFAKLE WGTELFGPLL QTEEILTEPL AFREFGLDLP
IGPGLGVALD MDKVHHFRRD GPSRTVVGQP IEESA
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