Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0973 |
Symbol | |
ID | 5197478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 1081355 |
End bp | 1082545 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640580519 |
Product | Rieske (2Fe-2S) domain-containing protein |
Protein accession | YP_001261478 |
Protein GI | 148553896 |
COG category | [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0971663 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCC AGCCTTGCCG CTTCATGGAG CGCTATCCCG AGGAGGGCCG CGACCCGATC CCGGTCGAGC GCTACACCTC GCCCGACTAT TTCAACCTCG AACGCGAGCG AATATTCCGC CGCAAATGGC TGAATGTCGG CCAGATTCTC CAGGCGCCGA AGCCCGGCGA CTATTTCGTC GCCGACCTCA AGATCCTCGA CACCTCGCTG CTGGTGATCC ACGGCAAGGA CGGCCGGTAT CGCGCCTTCC ACAACATGTG CTCGCACCGG GGGGCGCCGG TCGCCTGGGA TGCGCAGGGC TCGTGCAAGG GCTATCTCGC CTGCCGCTTC CACGGCTGGG TCTACGACAC CACCGGCAAG CTGGTGCAGA TCAGCGACGC CGCCAACTTC CCCGGCGTGA AGGCCGAGGA GAACGGCCTG ACCCCGGTCC ATTGCGCGGT GTGGAAGGGC TTCATCTTCG TCAACATGGC GGCCGAGCCG GAGGAGACGC TGCTCGATTA TCTCGGCCCC GTCGCCGAGG AGGTCGGCCG GTTCGACTTC GACGGCTTCA CCCCCGCCTT CTCCTACCGC ATCGACGAGA ATGTGAACTG GAAGACGTTG CAGGAGGCGC AGCTCGAAGG CTGGCACCTG CCCTATCTCC ACGAAAAGAC GCTGGCCCGC GCGGTGAAGG TCGACGGCAA CCAGTATCGC CATGCCGCGA TCGAGCTGCA CGGGATGCAC GGCGTGCTCG GCTCGCCGCC GCCCGACAGC TTCACCCCGC CGCCGACCGC GATGCTCGCC AGCCGCTTCG GGACGGGCAC CGTCCAGGCG TTCGGCGCCA AGCTCGACGG CAACGGCGAA GGCTATCGCT TCCGCGGCTC GTTCGACTTC TGGCACATCT TCCCGAACTT CTTCGTCGGG CTGCTCAACG GGCTGTTCTT CACCTTCAAC ATCTGGCCGC AGGCGGTCGA CCGCAGCGTG TGGGAGATCA AGGGCTATTA TCCGCCGGTG AAGACCGCCG GCGAGCTGTT CGCCCGCGAA TATTCGAAGG TCGGCCTGCG CGATCCGATG ATGGAGGACT GCTTCACCCA CGAGCTGATC TGCGCGCAGC TCAAGTCGGG CGCCAAGCAG CACATCTTCT TCCAGGACGA GGAGATGCTC GCCCGCCACC TGAGCAACGG CGTCGACCGC TGCGTGCGCG GCCTCGCCTG A
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Protein sequence | MSTQPCRFME RYPEEGRDPI PVERYTSPDY FNLERERIFR RKWLNVGQIL QAPKPGDYFV ADLKILDTSL LVIHGKDGRY RAFHNMCSHR GAPVAWDAQG SCKGYLACRF HGWVYDTTGK LVQISDAANF PGVKAEENGL TPVHCAVWKG FIFVNMAAEP EETLLDYLGP VAEEVGRFDF DGFTPAFSYR IDENVNWKTL QEAQLEGWHL PYLHEKTLAR AVKVDGNQYR HAAIELHGMH GVLGSPPPDS FTPPPTAMLA SRFGTGTVQA FGAKLDGNGE GYRFRGSFDF WHIFPNFFVG LLNGLFFTFN IWPQAVDRSV WEIKGYYPPV KTAGELFARE YSKVGLRDPM MEDCFTHELI CAQLKSGAKQ HIFFQDEEML ARHLSNGVDR CVRGLA
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