Gene Swit_0973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0973 
Symbol 
ID5197478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1081355 
End bp1082545 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content66% 
IMG OID640580519 
ProductRieske (2Fe-2S) domain-containing protein 
Protein accessionYP_001261478 
Protein GI148553896 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0971663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCC AGCCTTGCCG CTTCATGGAG CGCTATCCCG AGGAGGGCCG CGACCCGATC 
CCGGTCGAGC GCTACACCTC GCCCGACTAT TTCAACCTCG AACGCGAGCG AATATTCCGC
CGCAAATGGC TGAATGTCGG CCAGATTCTC CAGGCGCCGA AGCCCGGCGA CTATTTCGTC
GCCGACCTCA AGATCCTCGA CACCTCGCTG CTGGTGATCC ACGGCAAGGA CGGCCGGTAT
CGCGCCTTCC ACAACATGTG CTCGCACCGG GGGGCGCCGG TCGCCTGGGA TGCGCAGGGC
TCGTGCAAGG GCTATCTCGC CTGCCGCTTC CACGGCTGGG TCTACGACAC CACCGGCAAG
CTGGTGCAGA TCAGCGACGC CGCCAACTTC CCCGGCGTGA AGGCCGAGGA GAACGGCCTG
ACCCCGGTCC ATTGCGCGGT GTGGAAGGGC TTCATCTTCG TCAACATGGC GGCCGAGCCG
GAGGAGACGC TGCTCGATTA TCTCGGCCCC GTCGCCGAGG AGGTCGGCCG GTTCGACTTC
GACGGCTTCA CCCCCGCCTT CTCCTACCGC ATCGACGAGA ATGTGAACTG GAAGACGTTG
CAGGAGGCGC AGCTCGAAGG CTGGCACCTG CCCTATCTCC ACGAAAAGAC GCTGGCCCGC
GCGGTGAAGG TCGACGGCAA CCAGTATCGC CATGCCGCGA TCGAGCTGCA CGGGATGCAC
GGCGTGCTCG GCTCGCCGCC GCCCGACAGC TTCACCCCGC CGCCGACCGC GATGCTCGCC
AGCCGCTTCG GGACGGGCAC CGTCCAGGCG TTCGGCGCCA AGCTCGACGG CAACGGCGAA
GGCTATCGCT TCCGCGGCTC GTTCGACTTC TGGCACATCT TCCCGAACTT CTTCGTCGGG
CTGCTCAACG GGCTGTTCTT CACCTTCAAC ATCTGGCCGC AGGCGGTCGA CCGCAGCGTG
TGGGAGATCA AGGGCTATTA TCCGCCGGTG AAGACCGCCG GCGAGCTGTT CGCCCGCGAA
TATTCGAAGG TCGGCCTGCG CGATCCGATG ATGGAGGACT GCTTCACCCA CGAGCTGATC
TGCGCGCAGC TCAAGTCGGG CGCCAAGCAG CACATCTTCT TCCAGGACGA GGAGATGCTC
GCCCGCCACC TGAGCAACGG CGTCGACCGC TGCGTGCGCG GCCTCGCCTG A
 
Protein sequence
MSTQPCRFME RYPEEGRDPI PVERYTSPDY FNLERERIFR RKWLNVGQIL QAPKPGDYFV 
ADLKILDTSL LVIHGKDGRY RAFHNMCSHR GAPVAWDAQG SCKGYLACRF HGWVYDTTGK
LVQISDAANF PGVKAEENGL TPVHCAVWKG FIFVNMAAEP EETLLDYLGP VAEEVGRFDF
DGFTPAFSYR IDENVNWKTL QEAQLEGWHL PYLHEKTLAR AVKVDGNQYR HAAIELHGMH
GVLGSPPPDS FTPPPTAMLA SRFGTGTVQA FGAKLDGNGE GYRFRGSFDF WHIFPNFFVG
LLNGLFFTFN IWPQAVDRSV WEIKGYYPPV KTAGELFARE YSKVGLRDPM MEDCFTHELI
CAQLKSGAKQ HIFFQDEEML ARHLSNGVDR CVRGLA