| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0970 |
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| Symbol | |
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| ID | 5196482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1078949 |
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| End bp | 1079980 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640580516 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001261475 |
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| Protein GI | 148553893 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.142678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGATCA CCAACCTGGA TGCGCCCCGC GACTGGGACG GGACCGGCAT GCCGCTGTCG
CGGCTCGCCC GGCTCGTGAC CACCGACATC GACGAGGTTC ATGATCATAT GAGCCGGATG
TTCTGCCCGC ACGACCTGCG GATCGAGGGC GGCAATCCGC CGATCGCGTT CCGCCACCAT
CAGGCGTCGC TCAAGTCGGT GACGTTCAAC GCCACCGATT ACGGCAATCC CTATGGCCGC
GTCGTCGTCA ACATCCCGCC GGCCAACGCG CTCTACCTGG TCCAGTTCTC GCTGTCGGGC
GTCGCCCAGA TCGCGCAGGA GAACAGCACG ATCGAGCTGT CGCCCGGCCA GATGTGCGTG
CTCGATCCCG ACGCGCAGGT GAAGCAGACC TTCGGGGAAG GCTACAAGCA CTTCACCGTC
AAGATGTCGA AATGCGGGAT CGAGGCGGTG CTGGCGCAGG AGCTGGGCTT CCGCCCGCGC
GAACTGCACT TCTCGGCCCA GCCGGTCCGC CTGCAGGGGC CGGCGGCGGC CTTCGCCCAT
CTCGTCCGCA CGATCTGCGA CGATCTCGAC TCGGGGATCG CCGGCTTCAC CCATGCGCGC
GCCTGCGGCA CGGTCGAGGA GGCGTTGCAG CGGCTGCTGC TGGCGGCGGT GCCGCACAAT
TATTCGGAGC TGTTCGACGC GCCGCCGTCG AGCCCGGCGC CCTATTATGT CCGCCGGGTC
GAGGATTATA TCCGCGAACA TTCGCGCGAT CCGATCTCGC TGGAGGAGAT GATCGCGGTG
TCGGGCGTCA GCGCCCGGTC GCTCCACGCC GGCTTCCGCC GCTTCCGCGA CACGACGCCG
ATGGTCTATC TGAAGAACCA CCGGCTCGAC CTGGCGCACC GCCAGCTCAA GATCGCGGCC
GACGACGGCC TGTCGGTGAC CGAGGTCGCG CTCGCCTGCG GCTTCACCCA TCTCTCGAAG
TTCGCGCGCG ACTATCTCGA CCGCTTCGGC GAGCGGCCCT CGGCGACGCT CAAGCGGATG
AACGCGCACT AG
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| Protein sequence | MMITNLDAPR DWDGTGMPLS RLARLVTTDI DEVHDHMSRM FCPHDLRIEG GNPPIAFRHH
QASLKSVTFN ATDYGNPYGR VVVNIPPANA LYLVQFSLSG VAQIAQENST IELSPGQMCV
LDPDAQVKQT FGEGYKHFTV KMSKCGIEAV LAQELGFRPR ELHFSAQPVR LQGPAAAFAH
LVRTICDDLD SGIAGFTHAR ACGTVEEALQ RLLLAAVPHN YSELFDAPPS SPAPYYVRRV
EDYIREHSRD PISLEEMIAV SGVSARSLHA GFRRFRDTTP MVYLKNHRLD LAHRQLKIAA
DDGLSVTEVA LACGFTHLSK FARDYLDRFG ERPSATLKRM NAH
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