| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0959 |
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| Symbol | |
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| ID | 5200036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1068594 |
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| End bp | 1069301 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640580505 |
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| Product | 3-oxoacid CoA-transferase, A subunit |
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| Protein accession | YP_001261464 |
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| Protein GI | 148553882 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.248714 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGA TTTACCCGAA CGCCGCAGCG GCGCTTGAGG GATTGCTGTT TGACGGAATG
ACGATCTCCG CCGGCGGTTT CGGCCTGTGC GGTGTTCCGG AGCGTCTGAT CGACGCGATC
GTCGCATCGG GCGTCGGCGG CCTGACGGTC GCGTCGAACA ATGCCGGCAT CGACGGGGAG
GGACTCGGCA AGCTGCTGCG CACCCGCCAG ATCAGGAAGA TGATCAGCTC CTATGTCGGC
GAGAACAAGG AGTTCGAGCG GCAATATCTG GCCGGCGAGC TCGAGGTCGA GTTCTGCCCC
CAGGGCACGC TGGCCGAGCG GATGCGCGCC GGCGGCGCCG GCATTCCCGG CTTCTACACG
AAGACCGGCG TCGGCACCCT CGTCGCCGAG GGCAAGGAGA GCAAGGAGTT CGACGGCGAG
ACCTATGTGC TCGAACGCGG CATCCGCTCC GACCTGGCGA TCATCAAGGG CTGGAAGGCC
GACGAGAGCG GCAACCTGGT CTTCCGCAAG ACCGCGCGGA ACTTCAACCA TCCGGCGGCG
ACCTCGGGCA AGGTCTGCGT GGCCGAGGTC GAGGAGATCG TGCCGGTCGG TAGCATCGAC
CCCGATCACA TCCACCTGCC GAGCATCTAT GTGAAGCGCC TCGTCCTCGG CGCGCCCTAT
GACAAGAAGA TCGAGTTCCG CACGACCCGC GCGAGGGAGA CCGCATAA
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| Protein sequence | MTKIYPNAAA ALEGLLFDGM TISAGGFGLC GVPERLIDAI VASGVGGLTV ASNNAGIDGE
GLGKLLRTRQ IRKMISSYVG ENKEFERQYL AGELEVEFCP QGTLAERMRA GGAGIPGFYT
KTGVGTLVAE GKESKEFDGE TYVLERGIRS DLAIIKGWKA DESGNLVFRK TARNFNHPAA
TSGKVCVAEV EEIVPVGSID PDHIHLPSIY VKRLVLGAPY DKKIEFRTTR ARETA
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