Gene Swit_0947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0947 
Symbol 
ID5198376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1059191 
End bp1059943 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content66% 
IMG OID640580493 
Productclass II aldolase/adducin family protein 
Protein accessionYP_001261452 
Protein GI148553870 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCACAG CCTCCGCACA ACCGCTCGAC GAAGCCACGC TTCGCCGCCA GCTCACCGAT 
TTCTACCACC TCGTCGTCCA TCTCGGCTGG TCGGAGATCA TCTTCAACCA TATCTCGGTC
CGGCTTCCAG GGCCCGAGCA TCACTATCTG ATGAACCCCT TCGGCCTGCT CTACGAGGAG
ATCACGCCCG AGAACCTGAT CAAGGTCGGG ATCGACGGCA AGCTGGTCGA GCCGTCGCCC
TATCCCGGCA ACCCGGCGGG GTTCGCGCTG CACGGCGTGA TCCATGCGAA CCGCCCCGAC
GTCGCCTGCG TCGCCCACAC CCACAGCAAT GCGGTGTCGG CGGTGGCGAT GAAGCGCGAG
GGGATCAGCC ACGACAATTT CTACGGCGCC CAGCTGTTCG GCCGGGTTGG CTATCATGAT
TTCGAGGGCA TCACCCTCTA TGACGACGAG CGCGGCCGGA TGCTGGAGAG CATCGGCGAC
AAGCATGTCC TGGTGCTGCG CAACCACGGC ATCGCGGTGT GCGAGCGGTC GATCCCGGCG
ACCTTCATGC TGCTGTGGAC GGTGCAGCGC GCGGCCGAGA TCCAATGCAT GTCGGGCCAG
GCCGGCGGCC CCGACACGAT CCTCGCCGAC AGCGTGCGGC AGCGCTGCGC CGACGACGCG
CTGCGGCTGG CGACCTCGGC CAGCTTCTCC GACATGGTGT TCGACGCCTC GGTCCGCCGG
ATGCGCGCCG AGCAGGCCTC AGCTCGGCGA TAG
 
Protein sequence
MVTASAQPLD EATLRRQLTD FYHLVVHLGW SEIIFNHISV RLPGPEHHYL MNPFGLLYEE 
ITPENLIKVG IDGKLVEPSP YPGNPAGFAL HGVIHANRPD VACVAHTHSN AVSAVAMKRE
GISHDNFYGA QLFGRVGYHD FEGITLYDDE RGRMLESIGD KHVLVLRNHG IAVCERSIPA
TFMLLWTVQR AAEIQCMSGQ AGGPDTILAD SVRQRCADDA LRLATSASFS DMVFDASVRR
MRAEQASARR