Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0945 |
Symbol | |
ID | 5199874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 1057062 |
End bp | 1058318 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640580491 |
Product | sarcosine oxidase beta subunit family protein |
Protein accession | YP_001261450 |
Protein GI | 148553868 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | [TIGR01373] sarcosine oxidase, beta subunit family, heterotetrameric form |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.943396 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATGC GCTATTCGGC GTGGACGGTT TTCAAACAGG GGCTGGGCGG CCAACGCGGC TGGAAGCCCG CCTGGCGGTC GCCCGACCCG AAGCCGGACT ATGAGGTCGT CGTCATCGGC GGCGGCGGCC ATGGGCTGGC GACGGCCTAT TATCTGGCCA GGACCTACGG CATCCGCCGC GTCGCGGTGC TGGAGAAGGG CTGGATCGGC GGCGGCAACA GCGGCCGCAA CACCACGGCG ATCCGGTCCA ACTATTATTA CCGCGCCAGC GCCCGGATGT ACGAGCATTC GCTCAAGCTC TACGAGAGGC TGTCGAAGGA GCTGAACTAT AATGTGATGT TCAGCCAGCG CGGCATGATC TCGCTGGCCC ACAGCCCGCA CGATGTCGAA CTGGCGCATC GGCAGGCCGG CGCGATGCGG CTCAACGGGG TGGACGCGGA CTTCCTGACG CCGGCCGAGA TCGCCCGGCG CGTGCCGATC CTCGACATGT CGCCCGAGGC GCGCTTCCCG GTGTTCGGCG GGCTGCTCCA GAAGCGGGCG GGCACCGCGC GGCACGACGC GGTGGTGTGG GGCTATGCCC GCGCCGCCGA TGCGCTGGGC GTCGACATCA TCCAGAATTG CGAGGTGACC GGCTTCCGGC GCGGCGCCGA CGGCGCGGTG ACCGGGGTCG AGACCTCGCG CGGGCCGATC GCGACGACGC GGATCGGCGT CGCGGTCGCC GGCCATTCGA GCCGGCTCGC CGAGATGGCC GGCTTCCGCC TGCCGATCAC CAGCTATGCG TTGCAGGCCT TCGTGTCGGA ACCGCTCAAG CCGGTGCTCG ACACCGTCAT CCTGTCGCCC GCGACCGGGG TCTATATGAG CCAGTCCGAC AAGGGCGGCC TCGTCATCGG CGGCGGGCTG GACCTCTATC CCTCCTATGC GCAGCGCGGC AACATGCCGG TGATCCGCAA CGTGCTGGGC GCGGTCGCGG CGCAATATCC GGCGCTCGGC CGGGTCCGGT TGCTGCGGCA ATGGGCCGGC ATCGTCGACG TCGTCCCCGA CAGCAGCCCG ATCATCGGCG CGTCGCCGGT GCCGGGGCTG TTCCTCGACT GCGGCTGGGG CACCGGCGGG TTCAAGGCGA TCCCGGTCGG CGGCACGATG CTGGCCCACC AGCTCGCCAC GCTGACGCCG CACGAACTGG CCGAGCCCTT CTCGCTCGAA CGCTTCACCA CCGGCGCGCT CATCGACGAA GCCGCCGGCT CCGGCATCGC GCACTGA
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Protein sequence | MKMRYSAWTV FKQGLGGQRG WKPAWRSPDP KPDYEVVVIG GGGHGLATAY YLARTYGIRR VAVLEKGWIG GGNSGRNTTA IRSNYYYRAS ARMYEHSLKL YERLSKELNY NVMFSQRGMI SLAHSPHDVE LAHRQAGAMR LNGVDADFLT PAEIARRVPI LDMSPEARFP VFGGLLQKRA GTARHDAVVW GYARAADALG VDIIQNCEVT GFRRGADGAV TGVETSRGPI ATTRIGVAVA GHSSRLAEMA GFRLPITSYA LQAFVSEPLK PVLDTVILSP ATGVYMSQSD KGGLVIGGGL DLYPSYAQRG NMPVIRNVLG AVAAQYPALG RVRLLRQWAG IVDVVPDSSP IIGASPVPGL FLDCGWGTGG FKAIPVGGTM LAHQLATLTP HELAEPFSLE RFTTGALIDE AAGSGIAH
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