Gene Swit_0940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0940 
Symbol 
ID5197969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1051512 
End bp1052399 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content72% 
IMG OID640580486 
Productmethenyltetrahydrofolate cyclohydrolase 
Protein accessionYP_001261445 
Protein GI148553863 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.545503 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCCA TCATCGACGG GAAGGCGATC GCGGCGGCGA TCCGGGCCGA GGTCGCGGCC 
GGCGTCACGG CGCTGACAGC AGAGGGCGGG GCCGCGCCGG GGCTGGCCGT CGTGCTGGTC
GGCGAGGACC CGGCGAGCCT GGTCTATGTC GGCCGCAAGA TCGCCCAGAC CCGCCAGGCG
GGCATCCGGT CGTTCGAGCA CCGGCTGCCC GCCGGGACGG GCGAGGCGGA CCTGCTCGGC
CTGATCGAGC GGCTCAACCG CGACGACGAG GTCCACGGCA TCCTCGTCCA GCTTCCGCTG
CCGCGCCACA TCCGCGCCGA TCGGGTGCTC GACGCAATCG ATCCGCTCAA GGACGTCGAC
GGCTTCCATC CGGTCAATGT CGGCCGGCTG TCGATCGGCA CCGACGGGCT GGTGCCCTGC
ACGCCGCTCG GCTGCATGTT GCTGCTGGAA ACGGTGATCG ACGATTTCCG GGGGCTCAAG
GCGGTCGTCA TCGGCAAGTC GAACATCGTC GGCAAGCCGG TGGCGATGCT GCTGCTCGAA
CGCGAGTGCA CGGTGACGGT GACGCACATC CTGACCCGCA ACCTGCCCGA CATCGTCCGC
ACGGCCGACA TCGTCGTGGT CGCGGCCGGC AGCCCGGGGC TGGTGCGCGG CGACTGGGTC
AGGCCCGGCG CGGTGGTGAT CGACGTCGGG ATCAACCGCA TCGGCGAACC GGGCAAGGAC
AGCCGCCTGG TCGGCGACGC CGCGTTCGAC GAGCTGGGCC ATGCGGCGGC GATCACGCCG
GTTCCCGGTG GGGTCGGGCC GATGACGGTC GCCTGCCTGC TGCGCAACAC GCTGGTCGCC
GCGCGCCGGC AGCAGGGGGC GGACGCTTCG CCTAAAAAAG GCGCCTGA
 
Protein sequence
MAAIIDGKAI AAAIRAEVAA GVTALTAEGG AAPGLAVVLV GEDPASLVYV GRKIAQTRQA 
GIRSFEHRLP AGTGEADLLG LIERLNRDDE VHGILVQLPL PRHIRADRVL DAIDPLKDVD
GFHPVNVGRL SIGTDGLVPC TPLGCMLLLE TVIDDFRGLK AVVIGKSNIV GKPVAMLLLE
RECTVTVTHI LTRNLPDIVR TADIVVVAAG SPGLVRGDWV RPGAVVIDVG INRIGEPGKD
SRLVGDAAFD ELGHAAAITP VPGGVGPMTV ACLLRNTLVA ARRQQGADAS PKKGA