| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0939 |
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| Symbol | |
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| ID | 5197968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1049015 |
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| End bp | 1051408 |
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| Gene Length | 2394 bp |
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| Protein Length | 797 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640580485 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001261444 |
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| Protein GI | 148553862 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase)
[COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAGC AGGCGCGGGT TGTGATCATA GGCGGCGGCG TGATCGGCTG CAGCATCCTC
TACCATCTCA CCAAGCAGGG ATGGACCGAC GTGGTGCTGC TCGAACGCAA GGAGCTGACG
GCGGGATCGA CCTGGCACGC GGCGGGCGGC TTCCACACCA TCAACGGCAA CGCCAACGTC
GCCCGGCTCC AGGCCTATAC CTGCGGCATC TACCGCGAGA TCCAGGAGCT TTCGGGGCAG
GACGTCGGCG CTCATTATGT CGGCGGGCTG CTGGTCGCGG CGACCGAGCA GCGCTGGGAA
TTCCTGCGCG CCGAACATGC CCGCCACCAT GTGCTGGGGA TCGAGTCCGA ACTGCTCGGC
CCGGCCGAGA TTGCGAAGCT CGTCCCGATC ATGGAGATGA GGGACGTGAT CGGCGCGATC
TACGATCCGC TCGAAGGCTA TCTCGATCCC TCGGGCGCGA CCTATGCCTA TGCCGGCGCA
GCGCGCGCGG CGGGCGCGAC GATCCACCGC TACACGATGG TCGAGGGTCT GGCGCTCCGG
CCGACCGGCG AGTGGGAGGT GCGGACCGAC AAGGGGACGA TCGTCGCCGA GCATGTCGTC
AACGCCGCCG GCCTGTGGGC GCGCGAGGTC GGCCGGATGG CCGGGGTCGA TCTGCCGCTG
GTGCCGATGG AGCATCACTA CCTGATCACC GACGACCTGC CTGAGCTGAA GGGTAGGCCG
GAGATGCCGT CGGTCGCCGA TCTCGACGGC GGGCTCTACC TGCGGCAGGA GCATGACGGC
ATGCTGCTGG GAGTCTACGA ACGCGACGCG GTGCCGTGGG CGGTGGCGGG GACGCCGTGG
GATTATGCCG AGAACGAGCT GCTCATCCCC GACCTCGACC GGCTCGGCGA GGACCTGACG
CGCGGGTTCG AGCGCTATCC CGCGATCGCC AATGCCGGGA TCAAGCGGAT CGTCAACGGC
CCCTTCACCT TCTCGCCCGA CGGCAACCCG CTGGTCGGCC CGATCGCCGG CCTGCCCAAT
TACTGGGTCG CCTGCGGGAT CATGGCGGGT TTCGTCCAGG GCGGCGGCAT CGGCCGGTCG
CTCGCCGAAT GGATCATCGA CGGCCAGCCG TCGATCGACG TCCACGGCAT GGACATCGCC
CGCTTCGACC CCAGGCTCCC CGAGCCGGTG ACGATCGCCC GCGCGCGGGA ATTCTACGGC
CGCCGCTTCG ACATCCCCTA TCCCAACGAG ATCTGGCCGG TCGGCCGCCC GCTCAAGACC
TCGCCGCTCT ATGCGGCGCA CGAGGCGAAG GGCGCGGTGT TCATGAGCAG CTTCGGCTTC
GAGGCGCCGG CCTATTTCGC GCCGCCGGGC GCGCCGTTCG AGGAGACGCC GACCTTCCGC
CGGTCGAACG CCTTCGCGAT CATCGGCGAG GAATGCCGCG CGGTCCGGGC CTCGGTCGGC
GTGGTCGACA TGTCGGCGGT GTCGAAATTC CAGGTCGACG GGCCGGGGGC GGAAGCCTTC
CTGCGCAAGG TGATCGCGTC GCCGCTGCCG GCGGTCGGCC GTACCCTGCC GGCGCTGCTG
CTGTCGAAGG TCGGCCGGAT CATCGGCGAC CTCAACGTCA GCCGTCTGGC CGGAGACCGC
TATCTGCTGA CCGCGCCGAC CTTCATGCAG GCGATCTACA TGCGCTGGTT CGAGGAGCAT
GGGCGCGGCC TCGACGTCGC GTTGCGCAAC GTCACCGACG AGCTGGGCGG GCTGTTCGTC
GCCGGCCCGC GCGCCGCCGC GCTGATCGAC GCGCTGAGCG CCCATCACCG CATCGGCAGC
GCCGTCGCGC CCGGCGAGCT GACCGAGGCG GCGATCGGCT ATGCGCCCTG CCACGTCCTC
GCCTCCGACC GGATCGGCGA ACCGGGCTTC GAGCTCTACA CGCCCACCGT CCACCTCTAT
CCGCTCTATC GCCAGATCAT GGCGGCGGGC GCCGGGATGG GCATCCGCGA CATCGGCATC
CGCGCGTTCA GCACGCTGGT CATGGAGCAT GCCCCGGGCA CCACCCTGCG CGAGATGTCG
CAGGACCACA CGGTCGCCGA GTGCGGCTAT GGCGAGCTGC TCGACCGGAC GCGCGACGAC
TATGTCGGCT GCGCGGCGGC GCTCGCCTCG CTCGACGGCG AGCCCGAATA CCGGCTCGTC
GCGCTGCGCG TCGACACGGT CGACGCCGAT CCGGCGGGCG AGGAGCCGGT CTGGGTGGGC
AACGCCTATG TCGGCGCGAC CAGCTCGGGC TATTACGGCC ATACGGTGGG CTATGCGATG
GCGATGGCCT TCCTGGACGC CGCCGGGCGG GCCGAGGGAG CCGCGCTCGA AGTATCGGTG
CTGGGCGAGC GGCGGCCGGC GCATATCGTG CCATTGCCCT TTCCGAAGGG CTGA
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| Protein sequence | MQQQARVVII GGGVIGCSIL YHLTKQGWTD VVLLERKELT AGSTWHAAGG FHTINGNANV
ARLQAYTCGI YREIQELSGQ DVGAHYVGGL LVAATEQRWE FLRAEHARHH VLGIESELLG
PAEIAKLVPI MEMRDVIGAI YDPLEGYLDP SGATYAYAGA ARAAGATIHR YTMVEGLALR
PTGEWEVRTD KGTIVAEHVV NAAGLWAREV GRMAGVDLPL VPMEHHYLIT DDLPELKGRP
EMPSVADLDG GLYLRQEHDG MLLGVYERDA VPWAVAGTPW DYAENELLIP DLDRLGEDLT
RGFERYPAIA NAGIKRIVNG PFTFSPDGNP LVGPIAGLPN YWVACGIMAG FVQGGGIGRS
LAEWIIDGQP SIDVHGMDIA RFDPRLPEPV TIARAREFYG RRFDIPYPNE IWPVGRPLKT
SPLYAAHEAK GAVFMSSFGF EAPAYFAPPG APFEETPTFR RSNAFAIIGE ECRAVRASVG
VVDMSAVSKF QVDGPGAEAF LRKVIASPLP AVGRTLPALL LSKVGRIIGD LNVSRLAGDR
YLLTAPTFMQ AIYMRWFEEH GRGLDVALRN VTDELGGLFV AGPRAAALID ALSAHHRIGS
AVAPGELTEA AIGYAPCHVL ASDRIGEPGF ELYTPTVHLY PLYRQIMAAG AGMGIRDIGI
RAFSTLVMEH APGTTLREMS QDHTVAECGY GELLDRTRDD YVGCAAALAS LDGEPEYRLV
ALRVDTVDAD PAGEEPVWVG NAYVGATSSG YYGHTVGYAM AMAFLDAAGR AEGAALEVSV
LGERRPAHIV PLPFPKG
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