| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0931 |
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| Symbol | |
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| ID | 5200518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1036491 |
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| End bp | 1038734 |
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| Gene Length | 2244 bp |
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| Protein Length | 747 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640580477 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001261436 |
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| Protein GI | 148553854 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.171223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGAAAT CAGTTCTGGC CTTCGCATCG ATCGCCGCGA TCGGCGCGGC CCTGGCGGCG
GGAGCCGCCC AGGCGCAGGC AGCTTCCGGC GAAGCGCCGT CCGGCGACGA CATCATCGTC
ACCGCCAACC GCCAGGGCAG CCAGTCGATC CAGCGCGCCG CGCTCGCCAT CTCGGCGATC
AGCCCGAACG CGCTGGCCGA CAAGGGGCAG GGCGGCCTCG CCGACATCGC CAACGTCGCC
CCGTCGATCA ACGTCCAGCA GACCCAGCCC GGCGTGAACC GCGTCGACAT GCGCGGCATC
ACCACCGGCA CCATCTCGGT CACCAACGTG CAGGATCGCC CGCTGGTCGC GATCTACCTC
GACGACGTGC CGCTCGCATT GCAGAGCGGC AATCCCGAGC TCAAGGTGTT CGATCTCGAG
CGGATCGAGG TGATCCGCGG GCCGCAGGGC ACGCTCTACG GCGCCGGATC GATGGCGGGC
ACGATCCGCT ACATCACCGC CAAGCCGGAC ACCAAGGGCT TCTCCGGGTC GGCCGAGGGC
ATTGTCTCGA CGACCGCGCA CGGCAATCTG AACTATGGGC TGCGCGGCAT CGTCAACGCT
CCGCTCAGCG ACACGCTCGC GGTCCGGATC GGCGGCTATC AGGGGCGCAA CGCCGGTTTC
ATCGACAATA CGGGCCTGGG CAAGAAGAAC GCCAACAGCG ACGAGAGCAC CCAGGCGCGC
GTCGCCGCGC GTTGGACGCC GTCGCCGGAG TTCACTCTCG ACGCCAGCTT CACCTTCGCC
AAGCTTGACG TGAACGGCAC CAACGCCGGC TATGCGGGCT TCTCGCGCTA CAGTTACATC
ACGGCGGTGC CCGAGGTCTT CGACGACAAT CTGAAGATCT ACAACGTCAC CGGCGCCTAT
GACTTCGGCT TCGCGACGCT GTCCGCCTCG ACCTCCTATG TCGATCGCAA GACGCACAAC
ACCAGCGACT ATGGCGACAC CGCCGCACTG TTCGGCATCC CGTCCTTCGT GTCGCTGGGC
ATCGTCGACA ACCGGGTGAA GGATTTCTCC GAGGAGGTCC GGCTGGTGTC GGCCAAGTCC
GACCGGTTCA ACTGGACGGT CGGCGCCTAT TACCAGAAGA CCAAGCGCCA TTATTACCAG
GATACGCCGA CCACCGACTT CGACTCCACC TTCGGCGCGA TCATCGGCGA TCCGACCTTC
AACAGCCAGA CCGACTATCA GGCGTTCCAG CCCAACGACG TCTTCTCGGG CTTGCAGAAC
ATCGACGAGC ACCAGTTCGC CCTGTTCGGC GAGGCGACGC TGACGCTCGG TAAGTTCGAC
CTGACCGGCG GCCTGCGCTA TTTCGACTTC AAGCAGGATT TCGACCTGTT CTACTCGGGT
GTCGCCGGAT CGCTGGCGCC AGGCCAGCCG CTGACCCAGG CGGGGACCGA GAAGGCCAAC
GGCTTCAACC CGCGCGCCGT GATCGCCTAT CGCCCGCAAG AGAATCTGAT GCTCTATGCG
GAGGCGGCGC GAGGCTTCCG CTATGGCGGC GTCAACCAGC CGGTGCCGGC ATCCTTCTGC
GGCGCGGCGC TGGCGGCGGC GGGCCTGACC AGCGCGCCGC TCACTTTCGG CCCAGACAAT
CTGTGGAGCT ACACGGTCGG CGAGAAGGGG CAGTTCTTCG ATCGCCGCGT GACGTTCAAC
GTCGCCGCCT TCTACGTCGA CTGGAAGAAG GTGCAGACCA ACCGCAACCT CGACTGCGGC
TATTATTTCA CCCAGAACGC CGGCAAGGTC CGCAGCATGG GCCTGGAGCT GGAAAGCCGC
TTCAAGCTCA GCGACGCGCT GACGATCGGC ATCAACGGCT CCTACACCGA TGCGCAGGCG
AACGGGGCGA TCCCCAATGC CGGCGCGGTC GACGGCGACC GGGTGCCCTA TTTCCCCAAA
TATACGGTGG CGGCGAACGC GGCCTATGTC GTGCCGATCG AGGACGGATC GCTGACCTTC
TCCGGCGATT TCCAGATGCG CGGCAACAGC TATACCGAGT TCAACGAGGC CGATCCGCTG
CGCCGCAAGA TCCCCGCCTA CCAGACGGTC AACGCCTCGG TGACCTATGA CAGGGGGCCG
TGGGAGTTCA GCCTGTTCGG CACCAACCTG AACAACAGCC GGATGATCTC GCTGGTCAGT
CGCTCGCGCC CGACCGCGAT CGCCGACCGC TATTATTACG GCCGCCCGCG GACCTTCGGC
GCGCGCGCCA AGGTGCGGTT CTGA
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| Protein sequence | MGKSVLAFAS IAAIGAALAA GAAQAQAASG EAPSGDDIIV TANRQGSQSI QRAALAISAI
SPNALADKGQ GGLADIANVA PSINVQQTQP GVNRVDMRGI TTGTISVTNV QDRPLVAIYL
DDVPLALQSG NPELKVFDLE RIEVIRGPQG TLYGAGSMAG TIRYITAKPD TKGFSGSAEG
IVSTTAHGNL NYGLRGIVNA PLSDTLAVRI GGYQGRNAGF IDNTGLGKKN ANSDESTQAR
VAARWTPSPE FTLDASFTFA KLDVNGTNAG YAGFSRYSYI TAVPEVFDDN LKIYNVTGAY
DFGFATLSAS TSYVDRKTHN TSDYGDTAAL FGIPSFVSLG IVDNRVKDFS EEVRLVSAKS
DRFNWTVGAY YQKTKRHYYQ DTPTTDFDST FGAIIGDPTF NSQTDYQAFQ PNDVFSGLQN
IDEHQFALFG EATLTLGKFD LTGGLRYFDF KQDFDLFYSG VAGSLAPGQP LTQAGTEKAN
GFNPRAVIAY RPQENLMLYA EAARGFRYGG VNQPVPASFC GAALAAAGLT SAPLTFGPDN
LWSYTVGEKG QFFDRRVTFN VAAFYVDWKK VQTNRNLDCG YYFTQNAGKV RSMGLELESR
FKLSDALTIG INGSYTDAQA NGAIPNAGAV DGDRVPYFPK YTVAANAAYV VPIEDGSLTF
SGDFQMRGNS YTEFNEADPL RRKIPAYQTV NASVTYDRGP WEFSLFGTNL NNSRMISLVS
RSRPTAIADR YYYGRPRTFG ARAKVRF
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