| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0929 |
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| Symbol | |
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| ID | 5200516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1033586 |
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| End bp | 1034305 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640580475 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001261434 |
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| Protein GI | 148553852 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTGA AGGACAAGGT GGCGATCGTC ACCGGCGGAC ATAGCGGCAT CGGCCGCGGC
TGCGTCGAGA CGCTGATCGG CGAAGGCGCG ATCGTCTATG CCGCCGACCG CACGCCCTCC
CCGTTCGGCA CGGACGATCC GCGCCTGACC AGCGTGGCGC TCGATGTCAG CCGCGCCGAC
GAATGGGCCT CGCTGGCGGC CATGGTCGCG GCGGCGCATG GCGGCCTCGA CCTGCTCGTC
AACAATGCCG GGATCGGCTT CTTCGAGGGC ATCCACGACA CCTCGCTGGA GGCCTGGAAC
CAGGTGATCG CGGTCGACCA GACCGGCGTC ATGCTGGGCA TGCAGGCCTG CCTGCCGCTG
CTCCGCGAAC GGCGCGGCAA CATCGTCAAC ATCGCCTCGA TCTTCGGGAT CATCGCGATC
CCCGGCATGG CCGCCTATCA TGCCGCCAAG GGCGCGGTGA CCGCGATGAC GCGCAACGCG
GCGATCAGCT ATGCCGACTG GGGCGTCCGC GTGAACGCGA TCCACCCCGG GCTGATCGAC
ACCCCGTCGC TCCGCTCACG GGGGCCGGAG GCGGTGCAGG GCACGCTCGA CGCCACGCCG
CTCGGCGTGA TGGGTTCCCC GCGCGACGTG GCGATGGCGG TGCTCTACCT CGGCAGCGAC
GAGGCCCGCT TCGTCACCGG CGCCTCGCTG GTCGTCGACG GCGGCTACAC CGTCCAGTGA
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| Protein sequence | MRLKDKVAIV TGGHSGIGRG CVETLIGEGA IVYAADRTPS PFGTDDPRLT SVALDVSRAD
EWASLAAMVA AAHGGLDLLV NNAGIGFFEG IHDTSLEAWN QVIAVDQTGV MLGMQACLPL
LRERRGNIVN IASIFGIIAI PGMAAYHAAK GAVTAMTRNA AISYADWGVR VNAIHPGLID
TPSLRSRGPE AVQGTLDATP LGVMGSPRDV AMAVLYLGSD EARFVTGASL VVDGGYTVQ
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