| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0921 |
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| Symbol | |
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| ID | 5200683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1020612 |
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| End bp | 1023281 |
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| Gene Length | 2670 bp |
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| Protein Length | 889 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640580467 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_001261426 |
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| Protein GI | 148553844 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGGAT TTGCGCGTAC CGCATTGACG GGTTCGGCGG CTTTCATGTG CGTGGCGACG
GCTTCGTCGG CCTGGGCCCA GAGCAAGATC TTCAACATAC CCGCGCAATC GGCGACGACG
GGCATCGCCG CTTTCGGCCA GCAGGCGGAC GTGCAGATCG CCGCATCGCG CACTGTGACG
CAGGGCAAGC GTACCAAAGC GGTGAAAGGC GAAATGTCGG TCGGCCAGGC GCTGTCGCAA
CTTCTGGATG GAACGGGCCT TCAGGTCTGG CAGACGGGGG TCCAAACCTG GACCGTCGTT
GCCGCGCGGC CGACATCGCG AGTCGTCACG CATGGCCGAG GCACCGCTTA TGCCGCTCTG
GGCGACGCGG TAGGTGCAAG CGATCCGGAC AATGACGCGG CTGCCCGGCC GGCGGGTTCG
TCGAGCCCCG CCAGCGTCGC GCCCAGCCAG CATGCGGAAC CTCCGGAGAC TGGCGACATC
GTCGTCACGG CGAACCGGCG CGAGACGTCG ATCAACAAGG TTCCTATCAG CGTCTCGGCG
ATGACGCAGG AAAGCCTCGA CAGGCAGGGA ATCAAGAGGA TCGACGACCT TGCCAGAACG
ACCCCGGGCA TCAGTTTCCA ACGCTCCAGC TTCGCGGGCA TCGGCAATCG TTCGCAGATC
TCCATCCGTG GAATCGAGTC CAATGTCGGC GCGTCGACCA CGGGCATCTA TATCGACGAC
ACCCCCATTC AGACGCGAAA CGCGGGCTAT ACGAGCACCA GCGTGTTCCC GGCCATTTTC
GATCTCGAGC GCACCGAAGT GCTGCGCGGT CCCCAAGGCA CCTTGTTCGG CTCGGGCTCC
GAAGGCGGCA CGGTTCGCTT CATAACGCCG GACCCGGGGC TATCGCGCTT TTCGACCTAT
GATCGCGCGG AGCTGTCGTT CACGAAGAAT GGCGAGCCCA GCTATGAGGT GGGCAGCGCC
GTCGGCGCCC CCATCGTCGA GGACCGGCTC GGGGTGCGGC TCAGCGCGTT TTTCCGCCGC
GACGGCGGCT GGATCGATCG GGTCGACAGG AGCACCGGCA AGGTGCTCTC CTCCAACCAG
AACTCGAACG AGAGCATCGT CCTGCGCGCC GCGCTGACCT GGGCACCGAC ATCGTCGCTG
AAAATCACGC CGTCCTTCTA TTACCAGGAC CTGGATTCGC AGGGGGGCGA CGGATATTGG
GAGAGCCTGA GCGATGCCGG GGCCGGGCGG TTCCTGACGG GTAACGCCAT CGGCGCTCCA
TCGAGCGACA AGTTCAAGCT GCCGGCGCTG AAAGTCGAAT ATGACTTCGG CGGAGCGACG
CTGGTATCGA ACAGCTCCTA TCTGTCCCGC GATGCGATCG CCAATCCCGA TTACACGCAA
TTTGTCCGCG CCGTCACCAC GGGAAGCGCC TTTCCCCTGA TCCCCGGAGA GTTTTCGCGC
GGCTATTTCA TCGATGAGCA GAAGGGCTTC ACGCAGGAGG TGCGCCTCCA GTCGAACGAG
CATGGGTCAC GGCTGCACTG GGTCCTCGGC CTGTTCTACA ATCGCACCCG GCAGGTCGAT
ACGGAGATCA TATCGTCTCC TTTCTTTCCG CAGATCGTCC TCGATACCTA TGGGGTCGAC
TACATAACCA TCTTCGGCAA CCCGCTCGGG GCGCGGGATT CCGTCTATAC CGACGAGCAG
CGGACGAAGG ACAAGCAGAT CGCCGGGTTC GGCCAGGTCG ACTATGATAT CACCGACAAG
TTGAAGGCGA CCGTCGGTCT CCGCTACGCG AAGGTCGATT TCTCGTTCAC CTCCCGCAAC
GAAGGGCCGT TTGCCGGTGT CGCCACGAAC ACCGGGTCGC AATCGGAGAA ACCGCTCACG
CCGAAATTCG GCATTTCCTA CCAGGCGGAC GGCGCCAACC TCTATTATGC CAGCGCGGCC
AAGGGCTTTC GCCCCGGTGG TGCCCAGCGC CGGCCACCGT CGAGCTGCGC CAGCGACCTT
GCCGCGCTCG GCATCACATC GGCGCCGGAA ACCTATGATG CCGATTCGGT CTGGAGCTAT
GAGGTCGGCA CGAAGAACAG GCTGTTTGGC CGAAGCGTGA ATCTGGCGAC GAGCGCCTTC
TGGATCAATT GGAACAACAT ACAGCAGAAT GTTCCGCTCA ATGCCTGCGG GCAGTCGTTC
GTCGGCAATC TGGGAAAAGC GGTCAGCCGC GGGTTCGATA TAGCGATCGA TGCCAGAATA
GGCGATTTCA CGCTCGGGCT TTCGGGTGGG TATACCGACG CGCACTATAC GCAATCGATC
ATAAGCGGCA CTGCCGTGGT CGCGCTCAAG GGAGAAGAGA TTTCCACGAT CTCGCCCTGG
GTGGCGCATA TATCCGGCCA ATATGATTTC GCTCTCGCCG ACCATGATGG CTATGTCCGG
CTCGATTATG ATTATCGCAG CAAGGGCGCC AAGCCGAACA TCGCCGTGTT CGGGGTCGAT
CCGCTGCTGT TCCGGCGTCC CGAGACCCAT TTTTTCACCG CCCGCGCCGG GGTCGATGTC
GGCGGGCTCG ACGTCTCCCT GTTCGTCGAC AATCTGTTCA ACGCGCATCC GCTGCTGTCG
CGCACGCGCG ACATCGTCAG CTCGACGCTG ATCTACGGTT CCACCTTCCG GCCGCGGCGC
ATTGGCGTGA CGCTTTCGTA CCGCAAGTGA
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| Protein sequence | MNGFARTALT GSAAFMCVAT ASSAWAQSKI FNIPAQSATT GIAAFGQQAD VQIAASRTVT
QGKRTKAVKG EMSVGQALSQ LLDGTGLQVW QTGVQTWTVV AARPTSRVVT HGRGTAYAAL
GDAVGASDPD NDAAARPAGS SSPASVAPSQ HAEPPETGDI VVTANRRETS INKVPISVSA
MTQESLDRQG IKRIDDLART TPGISFQRSS FAGIGNRSQI SIRGIESNVG ASTTGIYIDD
TPIQTRNAGY TSTSVFPAIF DLERTEVLRG PQGTLFGSGS EGGTVRFITP DPGLSRFSTY
DRAELSFTKN GEPSYEVGSA VGAPIVEDRL GVRLSAFFRR DGGWIDRVDR STGKVLSSNQ
NSNESIVLRA ALTWAPTSSL KITPSFYYQD LDSQGGDGYW ESLSDAGAGR FLTGNAIGAP
SSDKFKLPAL KVEYDFGGAT LVSNSSYLSR DAIANPDYTQ FVRAVTTGSA FPLIPGEFSR
GYFIDEQKGF TQEVRLQSNE HGSRLHWVLG LFYNRTRQVD TEIISSPFFP QIVLDTYGVD
YITIFGNPLG ARDSVYTDEQ RTKDKQIAGF GQVDYDITDK LKATVGLRYA KVDFSFTSRN
EGPFAGVATN TGSQSEKPLT PKFGISYQAD GANLYYASAA KGFRPGGAQR RPPSSCASDL
AALGITSAPE TYDADSVWSY EVGTKNRLFG RSVNLATSAF WINWNNIQQN VPLNACGQSF
VGNLGKAVSR GFDIAIDARI GDFTLGLSGG YTDAHYTQSI ISGTAVVALK GEEISTISPW
VAHISGQYDF ALADHDGYVR LDYDYRSKGA KPNIAVFGVD PLLFRRPETH FFTARAGVDV
GGLDVSLFVD NLFNAHPLLS RTRDIVSSTL IYGSTFRPRR IGVTLSYRK
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