| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0914 |
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| Symbol | |
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| ID | 5200609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1007106 |
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| End bp | 1009514 |
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| Gene Length | 2409 bp |
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| Protein Length | 802 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640580460 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001261419 |
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| Protein GI | 148553837 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTTTAT GTGACGGGGG AACGCTTTCC CGGACCATGA AGGATATCGC CGGCCGAAAA
GATAGGGCCG GCGCGGTAAC GGCGTGCCGA TCGCGTTGGA AAACAGGGAG AAAAAAAGTG
GGTTTCGAAT CTCATTCGGT GAAAATCGCA CGCGGCAAGC GCTTTGTGCT GTTGGCGGCG
ACGGCCCTTG CCGGGATCGG TGGCCCCGCT TTCGCTCAGG CGACGACCGC GTCGGCCGAC
AGCGGCAGCG ACGAGATCAT CGTGACGGCG CTCAAGCGCA GCACCAACCT GCAGGATACC
CCGATCTCGA TTTCCGCCGT CACCGGCGAA GCGATCGCCA ATTCGGGCGT GCAGAGCATC
GCCGATCTCA ATTCCTCGGT TCCCAGCCTG GCCTTTGTGG ACGGCGGCCC GTCCAACCGC
CGCGTCGTCA TCCGCGGCAT CCAGGCCGCC GGCGAGCCGA CGGTCGGCAC CTATTATGAC
GAGACCCCCG TCACCGGCGC GATCGGCGCC GCCAACGACG CCGGCGGCTC GACCCCGGAA
CTGCGGCTGT TCGACGTCGA GCGCGTCGAG GTGCTGCGCG GTCCGCAGGG CACGCTGTAC
GGATCGGGAT CGATGGGCGG CACGCTGCGC GTCATCTATC AGAAGCCGAC CTTCGCCACG
GAAGGCGCCG TCGATCTGAG CCTGTCCGAC ACGCGCTATG GCGGCCTGAA CTACGAAGGC
AGCGCGATGG TCAACGTGCC GGTCGTGAAC GACAAGATCG CGGTGCGCGC GGTGGGCTTC
TACCGCAATG CCAACGGCTT CATCGACAAC ACCGCGCTGA ACATCAAGAA CATCAACGAC
CAGAAGAGCT ATGGCGGCCG TTTCCTGGTG CGCTTCACGC CCACCGAGGC GCTGACCATC
GACGCGGCGG CCTATATCAA CCGCAGCCGG ACCGACACCA ACGCCTGGAC GCTGACCTCC
GGCAAGTTCA AGTCGGATGC GCTTACCCGC CAGCCGGTGC GCGACAATCT CGAGCTCTAC
AGCCTCACCG CCAATTATGA TTTCGGCGGC GTCGTCCTGA CCGGCGTGGT CTCCTATCTC
GATCGCGACC TCGACTCGGT GTCGGACGTG TCGCGCTTCA TCCGGTCGAC CCGCACGCCG
GCCGGCTGCG CGGCCCGCGT CAGCGCCGGA CAGCCCTGTT CGACCGCCCA GCTCGACAAT
TATTATGCGC TGGTCGACTC GCAGTCGACG TCGGCGCTGT TCCCGCAGCA GACGATGAAG
AGCTGGACCG CCGAACTGCG GCTCAGCTCG GACGGCAGCG GTCCGCTCAA CTGGACGGTC
GGCGGCTTCT ATTCGGATCG CGACACCTCG GTCGCCAATC CGCAGAGCAA TGCCGATCCG
GTCAGCGGCG CGATCATCGA GCCGCAGCAG ATCGCCACGG TCCGCTTCAT CGACGACAGC
CTGCGGCAGG TCGCGGCCTT CGGCGAGTTC TCCTACGACG TCACCGATCG GCTCAACCTG
ACGGCCGGCG GCCGTTATTT CCGCTACAAC AAGGACATCA GCGGCCAGAC GACGATCGGG
TCGATCCTGG TGGGCGCGGT CGTCCGCCCG CTCTCCTTCG TCAAGTCGAA GGAGGACGGC
ACCGTCTTCA AGTTCAACGG GTCCTACAAG GTCACCGACA ACGTCCTCTT CTACGCCGAA
GCGGCGCAGG GCTTCCGCCC CGGCGGCGCC AACCAGGTCA TCGGCCTGGC GCAGGAGCTG
ACGCCCTACA AGTCGGACAG CCTGTGGAAC TATGAGGTCG GTTTCAAGAA CACGCTGTTC
GATCGCAAGC TGCTCCTCAA CGTCGATGTC TTCCAGATCG ACTGGAGCGA CATGCAGATC
ACCGGGCGCA CCCCGAACGG CGCCTTCTCG TTCATCACCA ATGCCGGCAA GGCACGCGTC
CGCGGCGCCG AGCTGGAAGC GACCATCCGT CCGACGGCCG GCTTCACGAT CACGGGCAAC
GCGTCCTACA TCGATGCCAA GCTGCGCGAG AACCAGAGCA ACGCCAATGT CAGCGCGCCG
GGCCTGAAGG GCGACCGGAT TCCCTATGTG CCGAAATTCT CGGCAGGCAT CGGGGCGCAA
TATGTCTGGG CGCTGACCGA CACGCTGTCC GGCTTCGCCC GGATCGACGG CAACACGGTC
GGCGGCTCCT ATTCGGACTT CCGGCCCACC GGCACCTTCA CGCGCAAGAT CGACTCCTAT
CAGCTCGTGA ACGCGCGCCT CGGCGTCGAA GGACCGGACA ACAAGTGGGG CGCCTATCTG
TTCGTCACCA ACCTGCTCGA CGACACGGCG ATCACCCGGT CGCAGTCGAG CGCGATCGCG
GTCGGGCGGA CGCTGGTGAA CAGCGCCGCG CCGCGCACCA TCGGCGTCAA CGTCCGCACC
AGGTTCTGA
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| Protein sequence | MSLCDGGTLS RTMKDIAGRK DRAGAVTACR SRWKTGRKKV GFESHSVKIA RGKRFVLLAA
TALAGIGGPA FAQATTASAD SGSDEIIVTA LKRSTNLQDT PISISAVTGE AIANSGVQSI
ADLNSSVPSL AFVDGGPSNR RVVIRGIQAA GEPTVGTYYD ETPVTGAIGA ANDAGGSTPE
LRLFDVERVE VLRGPQGTLY GSGSMGGTLR VIYQKPTFAT EGAVDLSLSD TRYGGLNYEG
SAMVNVPVVN DKIAVRAVGF YRNANGFIDN TALNIKNIND QKSYGGRFLV RFTPTEALTI
DAAAYINRSR TDTNAWTLTS GKFKSDALTR QPVRDNLELY SLTANYDFGG VVLTGVVSYL
DRDLDSVSDV SRFIRSTRTP AGCAARVSAG QPCSTAQLDN YYALVDSQST SALFPQQTMK
SWTAELRLSS DGSGPLNWTV GGFYSDRDTS VANPQSNADP VSGAIIEPQQ IATVRFIDDS
LRQVAAFGEF SYDVTDRLNL TAGGRYFRYN KDISGQTTIG SILVGAVVRP LSFVKSKEDG
TVFKFNGSYK VTDNVLFYAE AAQGFRPGGA NQVIGLAQEL TPYKSDSLWN YEVGFKNTLF
DRKLLLNVDV FQIDWSDMQI TGRTPNGAFS FITNAGKARV RGAELEATIR PTAGFTITGN
ASYIDAKLRE NQSNANVSAP GLKGDRIPYV PKFSAGIGAQ YVWALTDTLS GFARIDGNTV
GGSYSDFRPT GTFTRKIDSY QLVNARLGVE GPDNKWGAYL FVTNLLDDTA ITRSQSSAIA
VGRTLVNSAA PRTIGVNVRT RF
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