| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0902 |
|---|
| Symbol | |
|---|
| ID | 5200785 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 993068 |
|---|
| End bp | 993580 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640580448 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001261407 |
|---|
| Protein GI | 148553825 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5589] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR02444] conserved hypothetical protein TIGR02444 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0135492 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.076763 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCGACAT CATCAAAGCA TCGCCTGGAC ACCGTCTGGG CCTATTTCCT CGACCTCTAC
GCCAGGCCCG GCGTCAAGGA GACCTGCCTG GACTGGCAGG ATCGGCTGGG CGCCGACGTC
ATCCTGCTCC TGTGGCTGCT CCGGCTTGGC GCCGAGGACG GCCTCGCGGT GGATGACGTC
AGCCTGCGTC GGGTGGACGA GCGGATGAAG GAATGGCGCA TGTCGGCCAT CCTGCCGATC
CGCGACGCCA GGCGAGCCAC AGGCAAGCTT GCAAAGGCCG GCGACAGGGA CGCTTCCAGC
CTCTACCCGC GCCTCAAGCG CGTGGAACTC GCCGCCGAAC GCATGGCGCT GCGGCGGCTC
CTGCTGGAAG ACGGCGTCGC CGGACAGCGG CTGCCTGGAC AGCTTGCGGC CACCGCGAAC
CTGGAGCGCT ATCTCGGCAC CCTGGCCGAG GGGCTCGCCG CCGAAGAGCG GACGGCAATT
GCGAGATTGG TGAGCGCTGC TGAAGCAGGG TGA
|
|---|
| Protein sequence | MSTSSKHRLD TVWAYFLDLY ARPGVKETCL DWQDRLGADV ILLLWLLRLG AEDGLAVDDV
SLRRVDERMK EWRMSAILPI RDARRATGKL AKAGDRDASS LYPRLKRVEL AAERMALRRL
LLEDGVAGQR LPGQLAATAN LERYLGTLAE GLAAEERTAI ARLVSAAEAG
|
|---|
| |