| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0887 |
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| Symbol | |
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| ID | 5197571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 977676 |
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| End bp | 979034 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640580433 |
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| Product | amidase |
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| Protein accession | YP_001261392 |
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| Protein GI | 148553810 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.837099 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGGCA AGGACGGCGC CGTCTCAGCG CGACTGAGCC ATGTCCTGGA CCTGATCGCC
GCAGGTGCGG TCCCGGCCGA GCGCGCCTAT ACGCATATCC TGGCGGGTAC GGCGCGCGGC
GAGGCCCGCG CGGCCGACGG CCGCGCGGAT CGGGGCGAAG CGATCGGCGC GCTCGACGGC
GCCCTGGTTT CCGTCAAGGC GATGCTGGAC GTGCAGGGAC TCCTGACCGA TGCGGGGTCC
GCCACCCTGC GCGGACGGCC GCCGGCCGCG AGCGACAGCA GCGTGGTGTC ACGGCTTCGG
TCTGCGGGCG CCGTCGTCGT CGGCACGACG CAGATGACGG AGTTCGCCTT TTCGGCGGTG
GGCACCAATC CCAATTTCCC CGCCTTGGGC AATCCCCATG ACGCGGAGCG GATTTGCGGA
GGGTCGTCGT CGGGTGCGGC GGTTTCGGTC GGCGGGGGCC TGGCGGACAT CGCCATCGGC
AGCGATACGG GCGGCTCGCT GAGAATCCCG GCGGCCCTTT GCGGCCTGGT CGGTTTCAAG
CCAACGGCTT CGCGGGTTCC GGCGGCCGGC AGCTTCCCCT TGTCGCAGAC GCTCGATTCG
ATCGGCCCCA TCGCTCGATC GGTGAAGCTT TGCGCCCTGG CGGATTCGGT CCTTGCCACG
GGCAAGGCAT CGGACGTCGC GGCCATCGGC GTGGATCGCT TCCGGCTGGT CGTCGCCCGT
GGGAGGCTGT TCGAGGGTTG CGACCAGGCG GTGCTCGACG CCTTCGACGG CGCGATCGAT
CACCTGCGGC GATCGGACGT CCGGATCTCG GACGGATCGC TGGAACCGAT CCTCGACGAA
CTGGCCCGGA TCGATGGGCT CGGCACGTTC CCGCCGGTCG AACTGGCCGC GACCCTGCGC
AGCAGCGGCA TCACCGATCT GGCGCCGGTC GACCCCAACA CGCGGAGCCG GATCGAAGCC
GGCAGCGGCT TGTCGGCCGT CGATTATCTG GAGATGGCGC GCCTGCGGCG TCAACTGGCC
GACGGGTTCG AGCGGTCGAT GGAGGACGGG GAGGTATATG TCGTCCCCAC GGTCCCGATC
GTCGCGCCGA CGACGTCGTC GGTCAGCGAT CCGGAGCAGT TCCGACGGAT CAACGCCTTG
CTGCTCCGCA ATCCGCGGGT TGCCAATCTG CTCGATTGCC CCTCCATCTC GATACCGCTT
CCCAGCCGGG GCCTGCCGGT CGGGATGATG CTGATCGGAC GGCGGAACGC CGATCGGCAT
CTCCTGTCGA TCGCGTTGCG GCTGGAAGGC ATTCTCGCCC AGGGCGACCG GCTATGTCGG
GAGGACGGAT TGGGGATCGC TGGCGAGGGG AGGATTTGA
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| Protein sequence | MPGKDGAVSA RLSHVLDLIA AGAVPAERAY THILAGTARG EARAADGRAD RGEAIGALDG
ALVSVKAMLD VQGLLTDAGS ATLRGRPPAA SDSSVVSRLR SAGAVVVGTT QMTEFAFSAV
GTNPNFPALG NPHDAERICG GSSSGAAVSV GGGLADIAIG SDTGGSLRIP AALCGLVGFK
PTASRVPAAG SFPLSQTLDS IGPIARSVKL CALADSVLAT GKASDVAAIG VDRFRLVVAR
GRLFEGCDQA VLDAFDGAID HLRRSDVRIS DGSLEPILDE LARIDGLGTF PPVELAATLR
SSGITDLAPV DPNTRSRIEA GSGLSAVDYL EMARLRRQLA DGFERSMEDG EVYVVPTVPI
VAPTTSSVSD PEQFRRINAL LLRNPRVANL LDCPSISIPL PSRGLPVGMM LIGRRNADRH
LLSIALRLEG ILAQGDRLCR EDGLGIAGEG RI
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