Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0886 |
Symbol | |
ID | 5197570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 976922 |
End bp | 977674 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640580432 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001261391 |
Protein GI | 148553809 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.757223 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATTTA CGGAGTTCAA CGGGTCGAGC CTCTATTATG AGGTGCTGGG AGACGGCGAT CCGATCCTGC TGATCCATGG CGCGGCGGTA TCGGGGCTGT GGTTCGGCGA CCTTCCGGCC CGGCTGGCCG AGACCCATCG CGTGATCATG CCCGACCTGC GCGGACTGGG ACGCAGCCAG CGCGTCGAGG CGCTCGCGGG GCCAAGGGCC TGGGTCGAGG ACATGTGGCA CGTCATGGAC GTGGCGGGGG TCGCCTCCGC CCATGTCATG GGCTGCTCGC TCGGCTCGCG CATCGCCGCG CGCATGGCCA TCGAGAAGCC CGACCGGGTC CGCACCCTCA CCGTCGACGC CCCGATCATC GGCCTCAGCG CCCATGGCAA CAGTTCGCTC GGCACCGTCT TCGGCGAGGT CGACGAGGAC AGCGACCAGG CCCGCGAATG GGCCCAGCTC CATGGTCCCG ACTGGCGCGA GGTCGTCGCC TTCTACGGTC GCGCCCGCGC CACCCCCGGC CTCCAGGACT ATCTCACCGT CCGCGACGAA CTCGCCGACA TCGCCATGCC GACCCTCATC TGCCGCGGCG ACCTCGACGA TCCGGTCCAT CCGCTCGAAG CCTCCTTCAT CTGGCACAAG CAGACGCCGC GCACCGAATT GTTCGTCGCG CCAGGCATGG CCCAGTCCTC CGTCATGCTC GAACGCAAGG ACGACTTCCT CTCAGCCTTC GCCGCCTTCC TCCAGCGCAA CGACAAGGAC TGA
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Protein sequence | MAFTEFNGSS LYYEVLGDGD PILLIHGAAV SGLWFGDLPA RLAETHRVIM PDLRGLGRSQ RVEALAGPRA WVEDMWHVMD VAGVASAHVM GCSLGSRIAA RMAIEKPDRV RTLTVDAPII GLSAHGNSSL GTVFGEVDED SDQAREWAQL HGPDWREVVA FYGRARATPG LQDYLTVRDE LADIAMPTLI CRGDLDDPVH PLEASFIWHK QTPRTELFVA PGMAQSSVML ERKDDFLSAF AAFLQRNDKD
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