| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0877 |
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| Symbol | |
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| ID | 5197700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 969266 |
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| End bp | 970603 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640580422 |
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| Product | tRNA (uracil-5-)-methyltransferase Gid |
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| Protein accession | YP_001261382 |
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| Protein GI | 148553800 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1206] NAD(FAD)-utilizing enzyme possibly involved in translation |
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| TIGRFAM ID | [TIGR00137] tRNA:m(5)U-54 methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.398126 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTCATC AGATACATGT GATCGGCGGC GGGCTCGCCG GTTCGGAAGC CGCGTGGCAG
CTCGCCCAGG CCGGCATCCG CGTGCGCCTC TCCGAAATGC GCGGGATCGA GGCGACGCCG
GCGCACCAGA CCGACAGCCT CGCCGAGCTG GTCTGCTCGA ACAGCTTCCG TTCCGACGAC
CCGACCAACG CGGTCGGCCT GCTCCATGCC GAGATGCGGG CGCTGGGATC GCTGATCATG
GCCAAGGCCG ACGCCCATCG CGTGCCCGCC GGCTCCGCGC TCGCGGTCGA TCGCGAAGGC
TATGCCGAAG CGGTCACCCA CGCCGTCGCC GGGCATCCCC TGATCGAGCT GGTCCGCGAA
CGGGTCGACG CGCTGCCGGC GGACGGCCCC GTGATCGTCG CCACCGGCCC GCTGACGGCC
GCCGCGCTGG CGGACTCGAT CGGCGCGGCG ACCGGCGCCG ACGCGCTCGC CTTCTTCGAC
GCGATCGCGC CGATCGTCCA CCATCACTCG ATCGACATGG ACGTCGCCTG GATGGCCTCG
CGCTGGGACA AGGGCGAAAC CAAGGACTAT ATCAACTGCC CGATGGACAA GGACCAGTAT
CTGGCCTTCC ACCAGGCGCT GCTCGACGGC GAGAAGACCG CGTTCAAGGA GTGGGAGAAG
GACACCCCCT ATTTCGACGG CTGCATGCCG ATCGAGGTGA TGGCGGAACG CGGCGTCGAC
ACGATGCGCT ACGGCCCGAT GAAGCCGGTC GGCCTCGACA ATCCGCGCAC CGGCCGCTGG
CCCTATGCGG TCGTCCAGCT CCGCCAGGAC AATGCGCTCG GCACATTGTG GAACATGGTC
GGCTTCCAGA CCAAGTTGAA GCATGCCGAG CAGGTCCGCC TGTTCCGCAC CATTCCCGGC
CTGGGAAAGG CCGAGTTCGC GCGGCTCGGC GGCCTCCATC GCAACACCTT CATCCAGAGC
CCCAAGCTGC TCGACGGCGC GCTGCGGCTG AAGTCGCGCC CGAACATCCG CTTCGCCGGG
CAGATCACCG GCTGCGAAGG CTATGTGGAA TCGGCGGCGA TCGGCCTGCT CGCAGGACGG
TTCGCGGCAG CCGAACTGCT CGGCCGGCCG ATCGAGACGC CGCCCGCCGC CACCGCGCTC
GGCGCGCTGC TGGGCCACAT CACCGGCGGC GCGGAGGCCG ACGGCTATCA GCCGATGAAC
GTCAATTTCG GCCTGTTCCC GCCGCTCGAA GGCGCGAAGG GCGGCCGCAA GCGCAAGGGC
GACCGCAAGG CGATGATGGC CGAGCGCGCC GGCGAGGCGC TCAAGGCATG GATGGACGGC
GGGGTCGAGC CGGCCTGA
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| Protein sequence | MVHQIHVIGG GLAGSEAAWQ LAQAGIRVRL SEMRGIEATP AHQTDSLAEL VCSNSFRSDD
PTNAVGLLHA EMRALGSLIM AKADAHRVPA GSALAVDREG YAEAVTHAVA GHPLIELVRE
RVDALPADGP VIVATGPLTA AALADSIGAA TGADALAFFD AIAPIVHHHS IDMDVAWMAS
RWDKGETKDY INCPMDKDQY LAFHQALLDG EKTAFKEWEK DTPYFDGCMP IEVMAERGVD
TMRYGPMKPV GLDNPRTGRW PYAVVQLRQD NALGTLWNMV GFQTKLKHAE QVRLFRTIPG
LGKAEFARLG GLHRNTFIQS PKLLDGALRL KSRPNIRFAG QITGCEGYVE SAAIGLLAGR
FAAAELLGRP IETPPAATAL GALLGHITGG AEADGYQPMN VNFGLFPPLE GAKGGRKRKG
DRKAMMAERA GEALKAWMDG GVEPA
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