| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0853 |
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| Symbol | |
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| ID | 5196324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 947892 |
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| End bp | 949013 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640580398 |
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| Product | OmpA/MotB domain-containing protein |
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| Protein accession | YP_001261358 |
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| Protein GI | 148553776 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins
[COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.452526 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAGC TTGCCATCCT GGCGGCCCTA GCATCTACCG CGCTCGCAGC GCCGTCCTTT
GCTCGTGACA ACGCCTGGTA CGTTGGTGTC GAAGGCGGTG GTCTGTTGCA GGAGGACATG
AAGTTCGACG TCGGTCCGTC GACGCTGTCG CCGGGCGGCC GTGCAACGGT CGACTCCAAG
ACCGGTTTCG ACGTCGACGG CATCGTCGGC TATGATTTCG GCATGTTCCG CCTTGAAGGC
GAAGTCGGTT ACAAGCGTGA CCGCGTGAAC AGCTTCACGA CCAGCGCGTC GCGCACCCCC
GCCGCCGTCG GTGGCGCCGG TGCTCCGGCC GGGACCTATC CGGACGCTTC GGGCAAGAAC
AGCGCCCTCA GCTTCATGGT CAACGGCCTG CTCGACTTCG GTGGCGAGGA AGGCTTCTCG
GGTTACATCG GCGGTGGTGC CGGTATCGCC CGCGTCAAGT TCGCCGGCTA CAACGTGTCG
GGCGACGACT TCCTGAATGA CTCGGACTCG AAGTTCGCCT GGCAGGCGAT CGCCGGCGTC
CGTTATCCGG TGTCGACCAA CGTCGACGTC GGCCTGAAGT ATCGCTACTT CAACGTCAAG
GACGCGAAGG TATTCGACCG CCTCGGCGCC GAATATGAGG GCACGTGGCG TTCGCACAGC
CTGCTGCTGA GCCTCGTCTA CAACTTCGGT GAGCCGGCTG CTCCGCCGCC GCCGCCTCCG
CCCCCGCCGC CGCCTCCTCC GCCCCCGCCG CCTCCGCCGC CGCCTCCGCC GGTGGTCGAG
ACTCCGGGTC CGTTCATCGT GTTCTTCGAC TGGGATAAGT CGGACATCAC GGCGGAAGCC
GCGTCGATCC TCGACAATGC GGCCAATGCC TATGCGACGA CCGGCCAGGC GCGGGTCCAG
CTTGCCGGCC ACGCCGACAA GTCGGGTAGC GACCAGTACA ATGTCGGCCT CTCGCAGCGT
CGTGCCGACG CGGTGAAGGC TTACCTCGCT GGCAAGGGCG TGCCGGACTC GGCGATCACG
ACCGAAGCGT TCGGTGAGAG CCGTCCGCTC GTCGACACCG CCGATGGCGT CCGCGAGCCG
CAGAACCGTC GCGTCGAAAT CACCTTCGGC GCCGGCATGT AA
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| Protein sequence | MRKLAILAAL ASTALAAPSF ARDNAWYVGV EGGGLLQEDM KFDVGPSTLS PGGRATVDSK
TGFDVDGIVG YDFGMFRLEG EVGYKRDRVN SFTTSASRTP AAVGGAGAPA GTYPDASGKN
SALSFMVNGL LDFGGEEGFS GYIGGGAGIA RVKFAGYNVS GDDFLNDSDS KFAWQAIAGV
RYPVSTNVDV GLKYRYFNVK DAKVFDRLGA EYEGTWRSHS LLLSLVYNFG EPAAPPPPPP
PPPPPPPPPP PPPPPPPVVE TPGPFIVFFD WDKSDITAEA ASILDNAANA YATTGQARVQ
LAGHADKSGS DQYNVGLSQR RADAVKAYLA GKGVPDSAIT TEAFGESRPL VDTADGVREP
QNRRVEITFG AGM
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