Gene Swit_0852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0852 
Symbol 
ID5199072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp947193 
End bp947744 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content71% 
IMG OID640580397 
Productsuperoxide dismutase, copper/zinc binding 
Protein accessionYP_001261357 
Protein GI148553775 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2032] Cu/Zn superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.260138 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGCA CTCGTTCGCT TTCGATGGGC CTTCTTGCCG CCCTGCCGAT CCTGCTCGCC 
GCGCCCGCCG CGGCGCTGGC GCATGATCAT GGTCATGGCG GCGGCGGAGC GATGGCCGAC
CTGATCGACG GCCAGGGCCA GACCAAGGGC AAGGCGACGA TCCGCCAGGG CAAGGACGGC
ATCGAGGTCG ACGTCAAGGC GGTCGGCCTG CCTGCCGGCG TCCACGCCGT CCACGTCCAC
ACCACCGGCA CCTGCACCGG CCCCGACTTC ACCAGCGCGG GCGGGCATTG GAACCCTGGC
AAGAAGCAGC ACGGCCACGA CAATCCGGCC GGCGCGCATA TGGGCGACAT GCCGAACATG
ACGGTCGGCG CCGACGGTAC CGGCGAACTC CGGACCGTGA TCAAGGGCGG GATGCTGACC
GGCGGCGCCG CGCCGCTGCT CGACGCGGAC GGCGCCGCCG TCGTCGTCCA TGCCGCCGCC
GACGACTATA AGACCGATCC GACCGGCAAT GCCGGCGGTC GTCTCGCCTG CGGCGTGATC
AAGGCCGAAT GA
 
Protein sequence
MSRTRSLSMG LLAALPILLA APAAALAHDH GHGGGGAMAD LIDGQGQTKG KATIRQGKDG 
IEVDVKAVGL PAGVHAVHVH TTGTCTGPDF TSAGGHWNPG KKQHGHDNPA GAHMGDMPNM
TVGADGTGEL RTVIKGGMLT GGAAPLLDAD GAAVVVHAAA DDYKTDPTGN AGGRLACGVI
KAE