| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0840 |
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| Symbol | |
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| ID | 5198033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 937788 |
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| End bp | 938771 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640580384 |
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| Product | transketolase, central region |
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| Protein accession | YP_001261345 |
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| Protein GI | 148553763 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.272287 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAC CCGTCAAGAT GACGATGATC GACGCGATCA ACCGCGCCCT CCACGACGCG
ATGGAGGAGA ATGGGAAGAT ATTGCTGCTC GGCGAGGACG TCGCCGATCC CGAGGACGGC
GGCGTCTTCG GCGCGACCAG GGGGCTTTCG ACCAGGTTCG GCGAGGACCG GGTCAAATCG
ACGCCGATCT CCGAACAGGC GATCGTCGGC GCCGCGATCG GCGCCTCGCT GGTCGGCTAT
CGCCCGGTCG CCGAGGTCAT GCTGATGAAC TTCATGACCG TCGCGATGGA CATGCTGGTC
AACCACGCCG CCAAGCTGCG CTTCATGTCG GGCGGCCAGA CGAGCGTGCC GATCACGGTG
CGCACGATGA CCGGCAGCGG CCTCTCGCTC GGCGGGCAAC ATAGCGATTT CGTCGAGGCC
TGGTTCGCGC ATACCGCCGG CATGAAGGTG GTGATCCCGT CGAGCGCCAA CGACGCCTAT
GGCCTGCTCC GCTCGGCGAT CGACGACGCC GATCCGGTGA TCTTCGTCGA GACTCTGCCG
ATCTACTGGG CGCAGGGCGA AGTGAGCTTC GAACGGATTC CGATCGGCAA GGCCCGCGTG
TGCCGCGAAG GCAGCGACCT GACGATCATC GCCTATGGGC AGATGGTGTC GCACAGCCTG
ACCGTCGCGA CCGAACTCGC CAAGCAGGGC AAGTCGGTCG AGGTGATCGA CCTCCGGACC
GTATCCCCCT GGGACCGGGA GACGGTGCTG GCGAGCGTCG CCAAGACGGG CCGCGCGCTG
ATCGTCCATG AGGCGGTCAA GGAATATGGC GTCGGTGCCG AGATCGCCTC GGTGATCGGC
GAGGCGCTGT TCGGCCGGCT CGTGGCGCCG GTCCAGCGGC TCGGCGCCGC CTATTGCCCG
GTGCCGTTCA GCAAGCCGCT CGAACAGGCC TTCGCCCCCA ATGCCGAGAG CATCGGCGCC
GCGGCGGCCG CGCTGCTTTC CTGA
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| Protein sequence | MTEPVKMTMI DAINRALHDA MEENGKILLL GEDVADPEDG GVFGATRGLS TRFGEDRVKS
TPISEQAIVG AAIGASLVGY RPVAEVMLMN FMTVAMDMLV NHAAKLRFMS GGQTSVPITV
RTMTGSGLSL GGQHSDFVEA WFAHTAGMKV VIPSSANDAY GLLRSAIDDA DPVIFVETLP
IYWAQGEVSF ERIPIGKARV CREGSDLTII AYGQMVSHSL TVATELAKQG KSVEVIDLRT
VSPWDRETVL ASVAKTGRAL IVHEAVKEYG VGAEIASVIG EALFGRLVAP VQRLGAAYCP
VPFSKPLEQA FAPNAESIGA AAAALLS
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