Gene Swit_0832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0832 
Symbol 
ID5201023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp925597 
End bp926601 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content67% 
IMG OID640580376 
ProductNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 
Protein accessionYP_001261337 
Protein GI148553755 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.430989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACCT TACCGCGCTT CAAGGCTGCG GCCGTCCAGG CGGCGCCCGC CTTCCTCGAT 
CCGGCCGCGA CGGTCGCCAA GGCGGCGGCG CTGATCCGGG AAGCCGCGCG CAACGGCGCC
GAACTCGTCG CCTTTCCCGA GGTCTTCGTC GCGGGCTATC CCTATTGGAA CTGGATCACC
GATCCGGTGA CGGGCGGCGC CTGGTTCGAC AGGCTGCTGC GGGCCTCCAT CCTCGTTCCC
GGACCCGAGA TCGACGCGCT GTGCGACGTG GCCCGCGAGA CGGGCGTCCA CCTCGTCATC
GGCGTCAACG AACGCAGCCC GGTTTCGCTC GGGACGATCT TCAACACGCT GGTCTTCATC
GGTCCGGACG GTCGCGTCCT CGGCCGGCAT CGCAAGCTGG TGCCGACCTG GGCCGAGAAG
CTGAGCTGGG CGCCGGGCGA CGGTTCCAGC CTCATCGTCT ACGACACCGC GATCGGTCCG
CTGGGCGGGC TGGCCTGCGG GGAGAACACC AATACGCTGG CGCGGTTCGC GCTGCTCGCC
CAGGGCGAAC TCGTCCATGT CGCCAGCTAT ATTGCGTTGC CCGTGGCGCC GCCCGATTAC
GACATGGCCG AAGCCATCAA GGTGCGCGCC ATGGCGCATT GCTTCGAAGG CAAGCTGTTC
ACCGTCGTGT CCTGTTCGAC CGTCTCCGAG GAGATCATCG AGGCGATGGA AAGCATCGTC
CCGGACGCCC GCGCCCGGTT GCAGCGCAGG AACAGTGCCT TTTCGGGGAT CATCGGCCCG
GACGGTCGCG TGATCGGCGA TCCGCTCATC GACGAGGAGG GGATCGTCTA TGCCGAGATC
GACCTCGGCA AGTGCATCCA GCCCAAGCAG ATGCACGACA TCGTCGGCCA TTATAACCGG
TTCGACATCT TCGACCTGAG GGTCGATCGG ACGCCGCGCT CCCCGGTGAG CTTCACCGAT
GCGCCGCGCG ACGACCCCGA GACGGGCCCG ATCGATCCGG CCTGA
 
Protein sequence
MLTLPRFKAA AVQAAPAFLD PAATVAKAAA LIREAARNGA ELVAFPEVFV AGYPYWNWIT 
DPVTGGAWFD RLLRASILVP GPEIDALCDV ARETGVHLVI GVNERSPVSL GTIFNTLVFI
GPDGRVLGRH RKLVPTWAEK LSWAPGDGSS LIVYDTAIGP LGGLACGENT NTLARFALLA
QGELVHVASY IALPVAPPDY DMAEAIKVRA MAHCFEGKLF TVVSCSTVSE EIIEAMESIV
PDARARLQRR NSAFSGIIGP DGRVIGDPLI DEEGIVYAEI DLGKCIQPKQ MHDIVGHYNR
FDIFDLRVDR TPRSPVSFTD APRDDPETGP IDPA