Gene Swit_0831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0831 
Symbol 
ID5201022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp924820 
End bp925575 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content66% 
IMG OID640580375 
ProductAsp/Glu racemase 
Protein accessionYP_001261336 
Protein GI148553754 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3473] Maleate cis-trans isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.59669 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCC GTACCTATCG CATCGGACAG ATCGTGCCGT CGTCGAACAC GACGATGGAA 
ACCGAAATCC CCGCCATGCT GCGCGCCCGC GAGGGCATAT TGCCGGAGCG CTTCACCTTC
CATTCCAGCC GCATGCGGAT GAAGAAGGTG GTGAAGGAGG AACTCGAGGC GATGGACCGC
GACAGCGACC GCTGCGCGAC CGAGCTGTCC GACGCCCGCG TCGACGTGCT CGGCTATGCC
TGCCTGGTCG CGATCATGAG CATAGGCCAC GGCTATCACC GCGTCTCCGA AAAGCGCCTC
CACGAGCGGA CGGTCGAAAA CGACGCGCCC GCCCCGGTGG TGACCAGCGC GGGGGCGCTG
GTCGACGGGC TGCGGCGGAT CGGCGCGAAG AAGATTTCGG TGATCTGCCC TTATATGAAG
CCGCTGACCC GGCTGGTCGT CGACTATATC GAGAATGAGG GGATCACGGT CCACGACTTC
GCGGCGCTCG AAATCCCCGA CAATATCGAG GTCGGTCGCC ACGATCCCGA GCGGCTGCTC
GATATCTACC AGCGGGTCGA CCGCAGCGGC ATCGACGCTT TCGTGGCTTC GGCCTGCGTC
CAGATGCCGT CGCTGCCGAT CATCGATCGC CTGGAGCGCG AGGTCGGCGT TCCGGTGGTC
TCGGCCGCCG TCTGCACCAC CCACCAGATG CTCGACCGGC TCGGGCTCGA ACGCCGGGTG
CCGGGCGCCG GCGCCTTGCT TGGCGGCGGC TACTAA
 
Protein sequence
MNARTYRIGQ IVPSSNTTME TEIPAMLRAR EGILPERFTF HSSRMRMKKV VKEELEAMDR 
DSDRCATELS DARVDVLGYA CLVAIMSIGH GYHRVSEKRL HERTVENDAP APVVTSAGAL
VDGLRRIGAK KISVICPYMK PLTRLVVDYI ENEGITVHDF AALEIPDNIE VGRHDPERLL
DIYQRVDRSG IDAFVASACV QMPSLPIIDR LEREVGVPVV SAAVCTTHQM LDRLGLERRV
PGAGALLGGG Y