| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0828 |
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| Symbol | |
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| ID | 5201019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 920508 |
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| End bp | 922544 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640580372 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase |
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| Protein accession | YP_001261333 |
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| Protein GI | 148553751 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0871747 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTTT CCGCGACGTT GCGGGGGGCG ATCCTCGAGA TCATGGTCGA CAACCCGCCG
GTCAACGCGC TCGGCCATGC GGTCCGCAAG GGCCTGCTGG AAGCCCTGGA AGCGGGAGCC
CGGCAGCCGG AGGTCGAGGC GATCGTCATC GCCTGCGCGG GCCGGACCTT CTTCGCCGGG
GCCGACATCT CCGAGTTCGG CAAGCCGCCG CTCGATCCCA TCCTCCCCGA CCTGTGCAAC
GCGATCGAAG CGCTCGCGAA GCCCGTTGTC GCCGCGATCC ACGGCACTGC GCTGGGCGGC
GGGCTCGAAG TGGCGCTCGC CTGCCACTAT CGGGTGGCGG TGCCGTCCGC CCGGCTCGGC
CTGCCCGAGG TCAAGCTGGG CCTGATCCCC GGCGCCGGCG GCACGCAGCG GCTGCCCCGG
CTGGTTGGCG TCGCCGCCGC CACCGACATG ATCGTCTCCG GCGATCCGAT CCCGGCGGGC
AAGGCGGCGG AACTCGGCCT GGTCGATCAT GTCGCCGCCG AGGGATCGCT GATCGAGGAG
GCGCATCGCT GGGCGCAGGT CATTGCCGGC CGGCGGCCTC TTCCCCGAAC GGGGGAGCGG
CCGGTCGCGG GGGATGCCGC CGCGATCGAT CGATACGCCG AGACCCATGC GCGCAAGCTG
CGCGGCCAGA CGGCGCCGCA GGCCTGTTTC GAGGCGCTTC GCGCCGCGAT CGACCTGCCA
TTGGCGGAGG GGCTCGCCGT CGAGCGGGGG CTGTTCCGCC AACTCGTCGC GGGCGACCAG
TCCGCCGCGC TGCGCCACTA TTTCTTCGCC GAGCGGAGGG CCGCCCGGAT CGACGGGCTG
GACGCCTCGA TCGAGCCGCT TCCCATCGAG ACGGTCGGCG TCATCGGCGC CGGCACGATG
GGCGCCGGGA TCGCGATGGC CTTCCTGTCG AAGGGGCTGC GAGTCGTCCT TCTCGAAACC
GGCGCCGACG CGCTGGACCG GGGCCTCGCC AATATCCGGC GGACCTACGA AGCCAGCGTC
GCCAAGGGCC GGATGACCCA GGAGGCCGGC GACCAGGCGC TGGCCCGGCT GTCCACCACC
CTCGACTATG CCGCGCTCGG CGGTTGCGAC CTGATCATCG AGGCCGTGTT CGAACTGATG
GCGGTGAAGC GCGAGGTGTT CGCCCGGATC GACGCGGTCG CGCGGCCGGG CGCGATCCTC
GCCACCAACA CCAGCTATCT GGACATCGAC GAGATCGCCG CGGCGACCGG CCGGCCCGAT
CATGTCGTCG GCCTCCATTT CTTCTCGCCC GCCAACATCA TGAAGCTGCT GGAGGTCGTT
CGCGGCGCCC GGACCTCGCC CCGGGTGCTG GCGACGGCGA TGGCGCTCGC CAAGCGGATC
GGCAAGATCG CGGTCGTCGC CGGGAACGGC TATGGCTTCA TCGGCAACCG GCTGCTTGCG
CGGCGCCGCA GCGAGGCGTT CGAGCTGCTG CTCGAAGGCG TCGCGCCCTG GGACATCGAC
GAGGCGCATG TCGGCTTCGG CATGCCGATG GGCCCGTTCC GGATGTCCGA TCTCGCCGGT
GTCGACATCG GCTGGCACCG CGATCCCGCC CGGGTCGAGA ATGTCCGCGA CGCGCTGTGC
GCGGCCGGTC GCCTCGGCCA GAAGGCCGGC AAGGGCTATT ATGATTATGA CGAGGCGCGG
CAGGCGACGC CGTCGGCCGA GGCGCTGGCG ATCATCGACG CCTTCGCCAG GGGGCAGGGC
AGGGCGCGCC GGGACGTCCC GCGCGACGAC ATCCTGGAAC GCACCCTCTA CGCGATGGTC
GACGAGGGCG CGCGGCTTCT CGCCGAGGGC ATCGCGCAGC GCGCGTCGGA CATCGATGTC
GTGTGGGTCA ACGGCTATGG CTGGCCGTCC TATCTCGGCG GGCCGATGCA CTGGGCGGAA
CGGACGGGCC TCGCGCACAT CGTCGAGCGG CTCCGGGCGC ATGGCATGCC GGTCGCCCCG
CTGCTCGCCG AAAAGGCCGC GCGGGGCGAG CGTTTCGACG ATCCGCGGCC GGCATGA
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| Protein sequence | MTVSATLRGA ILEIMVDNPP VNALGHAVRK GLLEALEAGA RQPEVEAIVI ACAGRTFFAG
ADISEFGKPP LDPILPDLCN AIEALAKPVV AAIHGTALGG GLEVALACHY RVAVPSARLG
LPEVKLGLIP GAGGTQRLPR LVGVAAATDM IVSGDPIPAG KAAELGLVDH VAAEGSLIEE
AHRWAQVIAG RRPLPRTGER PVAGDAAAID RYAETHARKL RGQTAPQACF EALRAAIDLP
LAEGLAVERG LFRQLVAGDQ SAALRHYFFA ERRAARIDGL DASIEPLPIE TVGVIGAGTM
GAGIAMAFLS KGLRVVLLET GADALDRGLA NIRRTYEASV AKGRMTQEAG DQALARLSTT
LDYAALGGCD LIIEAVFELM AVKREVFARI DAVARPGAIL ATNTSYLDID EIAAATGRPD
HVVGLHFFSP ANIMKLLEVV RGARTSPRVL ATAMALAKRI GKIAVVAGNG YGFIGNRLLA
RRRSEAFELL LEGVAPWDID EAHVGFGMPM GPFRMSDLAG VDIGWHRDPA RVENVRDALC
AAGRLGQKAG KGYYDYDEAR QATPSAEALA IIDAFARGQG RARRDVPRDD ILERTLYAMV
DEGARLLAEG IAQRASDIDV VWVNGYGWPS YLGGPMHWAE RTGLAHIVER LRAHGMPVAP
LLAEKAARGE RFDDPRPA
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