| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0826 |
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| Symbol | |
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| ID | 5198532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 917354 |
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| End bp | 918115 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640580370 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001261331 |
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| Protein GI | 148553749 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.0978902 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGACCG GCCGCCGGCA TGCACTGGTG ACGGGCGGTG GCAGCGGCAC CGGCCGGGCG
GTGGCGCTCG GCCTGGCCGA CGCCGGCTGG CAGGTCACGA TCCTCGGCCG GAACGCGGCG
CGTCTCGCGG CGGTCGCCCA GGGCCATGAC GGCATGCTCG CGCTCGGCTG CGACGTCGGC
GACGAGGCGG CGGTCACGGC CGCCGTGGAG CAGGCGATCG AACGCCACGG CTCGGTCGGC
CTGCTGGTGA ACGGCGCCGG GATCGTCGAA ACGGCGCCCT TCGGAAAAAG CCCGGACGCG
CTGTGGGACA GGCTGTGGCG GACCAATGTG ATGGGGGCCG TCCACACCAG CCGGGCGGTG
CTTCCGGCCA TGCGCGCCTT GCCCGCCGCG CGGATCGTCA ACATCGCGTC GACCGCGTCG
CTCAAGGGCT ATGCCTATGT CAGCGCCTAT ACCGCGACCA AGCATGCGCT GCTGGGGATG
ACGCGGGCGC TGGCCCTGGA GCTGGTCGGC ACCGCGATCA CCGTCAACGC GGTCTGCCCC
GGCTATGCCG ACACCGACAT CGTCCACGAC GCCGTCGCCA ATATCGTCGC CAGGACGGGC
CGGAGCGAGG CCGACGCGAT GGCGACGTTC ACTGGCGCCA ATCCGCAAGG CCGGCTGATC
GATCCGGCCG AGATCCTCGG CACCGTCCTG TGGCTGGCGT CAGACGCGGC GCGATCGGTG
ACCGGACAGG CGATCGTCGT CGCCGGCGGC GAGATCATGT GA
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| Protein sequence | MTTGRRHALV TGGGSGTGRA VALGLADAGW QVTILGRNAA RLAAVAQGHD GMLALGCDVG
DEAAVTAAVE QAIERHGSVG LLVNGAGIVE TAPFGKSPDA LWDRLWRTNV MGAVHTSRAV
LPAMRALPAA RIVNIASTAS LKGYAYVSAY TATKHALLGM TRALALELVG TAITVNAVCP
GYADTDIVHD AVANIVARTG RSEADAMATF TGANPQGRLI DPAEILGTVL WLASDAARSV
TGQAIVVAGG EIM
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