| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0818 |
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| Symbol | |
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| ID | 5197313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 908556 |
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| End bp | 910925 |
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| Gene Length | 2370 bp |
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| Protein Length | 789 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640580362 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001261323 |
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| Protein GI | 148553741 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTGA TGGAAAGAGC GTCGCTCTTC GCGTTGGCGG CGGCCCTCGG CTCCGGCCAG
CTCTGGGCCG GGCAGGCCGG CGACATGCCG TCGGGCGGGA GCGTCGCGGC GGCCGACGGC
GCGTCCGAAG GCCTTGCCGA GATCGTCGTC ACCGCGCAGC GCAAATCGGA GAATCTCCAG
AAGGCGGCGA TCGCGATCGC CTCGGTCGGC GGCGACACCC TTCGGAGCGC GGGCGTGGTC
AATCCCGCGC AGCTCACGGC GCTGGTGCCG TCGCTCCAGG TTTCGAACGG CAACGGCGCC
TATGCCAATT TCTACATTCG CGGCGTCGGC AACTTCACCG GCAACGCGCT GACCGAGTCG
GCGATCGCCT TCAACTATGA CGGCGTCTAT GTCGCGCGCC CGTCCTCGAC CTCGGGCTTC
TTCTACGACC TCGAACGCGT CGAGGTGCTG AAGGGGCCGC AGGGAACGCT CTACGGACGC
AATGCCACCG GCGGCGCGAT CAACGTCCTG TCCCGTCAGC CCCAGTTCGA ATGGGGCGGC
CATGCCAATG CCAGCTACGG CAATTACGAT GCCGTCAACC TCGAAGGGGC GATCAACGCG
CCGCTGGCGC CCGACCTCGC CGTCCGCCTG ACCGGGATCT ACAACCGCCA CGACGGTTAT
ATGAAGGACG GCACCGACGA CCAGAAGGAA TATGGCGGCC GCCTCCAGCT ACGCTACGAG
CCGACCTCCG AACTCAGCAT CCTGATCGGC GCCGACTATT TCCACCAGGG CGGCAAGGGG
CCGGGCGGTA CGCTCGTCCC GACCGGCATC GACAAGCGCT ACGGCAATTT CTCGCCGCAG
GCCGACGCCT ATTATGCGGG CCTGCAACAT GTGGTGGGCG GAACGACCTT CAGCCCGCTG
CCGAACATCC AGTACCAGGA CAACACATAT TGGGGCGTCA ACGCCCGGAT CAACTACGCG
ACCGATTTCG GCACCTTCAC GATCATCCCG GCCTATCGCA GCTCGAAGCT CGATTACGTC
ACCGGCAATA TCGGCTTCTT CATCCTCCAG AAGGAGAAGT TCCGCCAGCA GACGCTCGAG
GCGCGCTATG CGTCGCCCGA CAGCCTGCCG GTCCAGGCCC TGGTCGGCGG CTATTATTTC
CGCGAGCGGG GCAGGGACCC GTACAACATC ATCAACAACC AGTTCGGCTT CGTCGACCAG
TTCGACCAGC GCTACGGCAC GACCAGCGCG GCGGCGTTCG GGCGGCTGAC CTATGCGGTG
ACGCCCGACG TCCACCTGAC CGGCGGGCTG CGCTACACCC ATGAGCGCAA GAAATATTCC
GGCCAGACGC TCGCGCTCAC CCGGGTGTGC CTCGCCGGCT TCGCGCAGTG CCAGGGGCAG
GCCGTCCCCT TCCCGAACAC GATCGTGCCG CCCACGGTGA CCGTCCTTCC CGACACGAGC
GTCGTGCCGG ACTTCACCTC CTTCGGTGCC TTCCCGTTCC AGGTCGGCCA GTTCGGCACG
CTGGTCGCGC AGGACAAGTC GAAGAGCTTC AACAAGGTCA CCTGGCGCGC CGGCGCCGAC
TGGACCGTGA CGCCGGGCAG CCTGCTCTAT GTGAGCTATG AGACGGGGTA CAAGTCGGGC
GGCTTCTACG CCACGCGCGA CGCCGGCATC TATCGGCCCG AGACGATCCG CGCCTGGACG
ATCGGCTCGA AGAACCGCTT CTTCGGCAAC CGCCTCCAGG TCAATCTCGA AGCCTTCTAC
TGGAAGTACA AGGACCAGCA GATCAGCCAT CTCGGCGTGG ACTCGGCCAA TGCGCTGATC
TTCCCGACCG AGAATATCGG CCGGTCGACC TTGAAGGGCG TCGAGGCCGA CATCCAGTAC
CTGCTCACGC CGACGACGCT GCTCAACGCC GACATCCAGT ATCTGTCGGC GAAATATGAT
CGGTTCGTCT ACACCACCCC GGCGGCGGGC GGCACGCCCC AGACCGGCTG CGCGGTGTCG
CCGATCGCCA CCGGCTTCTC GGTCGATTGT TCGGGCTTCC GGCCGCCGCA GTCGCCGGCC
TGGTCGATCA ACCTGGGCCT GACCCAGACC TTCGAGCTGG GCAGCGGGGC GAAGATCGTC
TTCGACGGTC GCGCGCATTA TCAGAGCCGC ACCCTGACCT CGCTCGAATT CCTCGATCAG
GAATATCAGG ACGGCTATCT GCTCGGCGAC CTTCAACTCA CCTATCACGA CCCGTCGGAC
CGGTTCACCG TCGCCGGCTT CGTCAACAAT GTCGGCGACA AGACGGTGAA GGGCCAGACC
TATCTCGTCA CCTATGCCGC GGTCCCGACA GCCTCCGCGA TCCTGCGCCC GCCGCGCACC
TATGGCGTCC GCCTGGGCTA TAATTTCTGA
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| Protein sequence | MKVMERASLF ALAAALGSGQ LWAGQAGDMP SGGSVAAADG ASEGLAEIVV TAQRKSENLQ
KAAIAIASVG GDTLRSAGVV NPAQLTALVP SLQVSNGNGA YANFYIRGVG NFTGNALTES
AIAFNYDGVY VARPSSTSGF FYDLERVEVL KGPQGTLYGR NATGGAINVL SRQPQFEWGG
HANASYGNYD AVNLEGAINA PLAPDLAVRL TGIYNRHDGY MKDGTDDQKE YGGRLQLRYE
PTSELSILIG ADYFHQGGKG PGGTLVPTGI DKRYGNFSPQ ADAYYAGLQH VVGGTTFSPL
PNIQYQDNTY WGVNARINYA TDFGTFTIIP AYRSSKLDYV TGNIGFFILQ KEKFRQQTLE
ARYASPDSLP VQALVGGYYF RERGRDPYNI INNQFGFVDQ FDQRYGTTSA AAFGRLTYAV
TPDVHLTGGL RYTHERKKYS GQTLALTRVC LAGFAQCQGQ AVPFPNTIVP PTVTVLPDTS
VVPDFTSFGA FPFQVGQFGT LVAQDKSKSF NKVTWRAGAD WTVTPGSLLY VSYETGYKSG
GFYATRDAGI YRPETIRAWT IGSKNRFFGN RLQVNLEAFY WKYKDQQISH LGVDSANALI
FPTENIGRST LKGVEADIQY LLTPTTLLNA DIQYLSAKYD RFVYTTPAAG GTPQTGCAVS
PIATGFSVDC SGFRPPQSPA WSINLGLTQT FELGSGAKIV FDGRAHYQSR TLTSLEFLDQ
EYQDGYLLGD LQLTYHDPSD RFTVAGFVNN VGDKTVKGQT YLVTYAAVPT ASAILRPPRT
YGVRLGYNF
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