Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0793 |
Symbol | |
ID | 5196338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 878317 |
End bp | 878931 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640580337 |
Product | acetyltransferase |
Protein accession | YP_001261298 |
Protein GI | 148553716 |
COG category | [R] General function prediction only |
COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0950011 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCACCC ATCGCAACGC GGCGTTCCTG TCGCCCGACG AACTGGCGGA ACTCGACTTC GCCCATCTGG GCAAGGACGT CCTGATCCAT TCGACCTGCG TGCTGGTCAA CTGCCAGCGC ATGTCGATCG GCGACGGCGT GCGGATCGAT CCTTTCTGCG TGCTGTCGCC GGGCAGCAGC CTGGAGATCG GCGACCATGT CCACATCGCC GCGCAATGCG TGCTGATGGG GTCGGCCGCG ATCGCGCTCG GCGATTTCGC CGGGCTCTCG CACGGCGTGA AGATCCTCTC CGCCTCCGAT GATTTCGTCG GCGGATCGCT GATCGGGCCG ACCATCCCCG ACGCCTTCCG GACGGTCGAC GCCCGGCCGG TGCGGCTGGC GCGCCACGCC GTGATCGGCG CCGGCGGGCT GGTGCTGCCG GGATCGACGA TCGAGGAAGG CGCGACGGTC GGCTCGCTCT CGCTGGTCAA GGGCTCGCTC GCGGCCTGGA CCGTCAACGC CGGCACCCCC GCCCGCAAGG TCCGCGATCG CGACCGCGAC GGCGTCCTCG ACGCCGAGCG AAGGTTTCGC GCCTCCCGCC CGCCCCGATT GCCGCGCCCC GCATTCGAGG CTTGA
|
Protein sequence | MATHRNAAFL SPDELAELDF AHLGKDVLIH STCVLVNCQR MSIGDGVRID PFCVLSPGSS LEIGDHVHIA AQCVLMGSAA IALGDFAGLS HGVKILSASD DFVGGSLIGP TIPDAFRTVD ARPVRLARHA VIGAGGLVLP GSTIEEGATV GSLSLVKGSL AAWTVNAGTP ARKVRDRDRD GVLDAERRFR ASRPPRLPRP AFEA
|
| |