Gene Swit_0783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0783 
Symbol 
ID5197327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp866255 
End bp866707 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content65% 
IMG OID640580327 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001261288 
Protein GI148553706 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.514102 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAGA TGGACGGCCG GATCCTCCGC ACGATCCAGA AGCATCCCGA CCTCGCGGTG 
GCGGAACTGG CCGAGCGCGT CGGGCTGTCG CACACGCCCT GCTGGCGGCG GCTAAAGCGC
CTCCAGGCGA GCGGCGTGAT CGAGCGGAAC GCGGTGATCC TCAACCCCAA GCGGCTCGGC
CTGGAGGCGG TGGTGTTCGC CAGCATCCGG CTGAAGCAGC ATGACGAGGA GACGCTGGAC
GCGTTCGAAA CCGCGATCCG CAACCTCCCG CAGATCGTCG AATGCTTCTC GATGAGCGGC
GACAGCGACT ATCAGCTCCG CATCGTCGTC GCGAACATCG AGGCCTATCA CGACTTCCTG
AAGAAGATCG TGCTCCACCT GCCCGGCGTC GCCTCGGTCA ACTCGCACTT CGCGCTCAAC
ACGGTGAAGC TGACCACCGA CCTGCCGATC TGA
 
Protein sequence
MDEMDGRILR TIQKHPDLAV AELAERVGLS HTPCWRRLKR LQASGVIERN AVILNPKRLG 
LEAVVFASIR LKQHDEETLD AFETAIRNLP QIVECFSMSG DSDYQLRIVV ANIEAYHDFL
KKIVLHLPGV ASVNSHFALN TVKLTTDLPI