| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0778 |
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| Symbol | |
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| ID | 5197297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 860026 |
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| End bp | 861105 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640580322 |
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| Product | branched-chain amino acid aminotransferase |
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| Protein accession | YP_001261283 |
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| Protein GI | 148553701 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01123] branched-chain amino acid aminotransferase, group II |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCCC AGTTCACCAT CCTGCCCAAC GCGGCGCCGA CCCCGGCCGA AGACCGCGCC
AAGCTGCTGG AAAATCCCGG CTTCGGCCGC GTCTTCACCG ACCATATGGT CGTCGTCCGC
TATGTCGAGG GCAAGGGCTG GCACGATGCC GAGGTGAAGG CGCGCGGGCC GCTGCAGATC
GATCCGGCGT CGGCGGTGCT CCATTATGCG CAGGAGATCT TCGAGGGGAT GAAGGCCTAT
CGCCTGGACG ACGGCCTGGC GCTGTTCCGG CCCGAGGCGA ACGCCGCCCG CTTCAACCTG
TCGGCGCGCC GCATGGCGAT GCCCGACGTG CCCGAGGAGC TGTTCATCGA GGCGGTCGAG
CAGCTCGTCC GCATCGACCG CGACTGGGTG CCGGGTGGCG GCGGCAGCCT CTACCTGCGC
CCGTTCATGT TCGCGAACGA GGTGTTCCTG GGCGTCAAGC CCTCGTCCGA ATATCTGTTC
ATGGTGATCG CCTCGTCGGT CGGCGCCTAT TTCAAGGGCG GCAAGGACTC GGTCACCGTC
TGGGTCTCGA CCGACTATAC CCGCGCCGCG CCGGGCGGCA CCGGCAGCGC CAAGTGCGGC
GGCAACTATG CCGCCAGCCT CCTCGCCCAG AAGCAGGCGA CCGAGCATGG CTGCGACCAG
GTCGTCTTCC TCGACGCCGC CGAGCGCAAG TGGATCGAGG AACTGGGCGG CATGAACGTC
TTCTTCGTGA TGGACGACGG ATCGATGGTG ACGCCGCCGC TGCAGGGCAC GATCCTGCCC
GGCATCACCC GCGACTCGAT CATCCGCCTG GCGCGCGACG AGGGCATCGC GGTCCGCGAG
GAGCCCTATT CCTACGAGCA GTGGAAGGCC GACGCCCGCT CGGGCAAGCT GGTCGAGACC
TTCGCCTGCG GCACCGCCGC GGTCGTCACC GCGATCGGCA CGGTCAAGGG CGATGACGGC
GAGTTCACCA TCGGCGCCGG CGGCACCGGC CAGACCACGG CGCGGTTGCG CGACAGGCTG
ACCGGCATCC AGCGCGGCAC CGTCGCCGAC CCCTATGGCT GGGTGCGCCG GGTCGGTTGA
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| Protein sequence | MTSQFTILPN AAPTPAEDRA KLLENPGFGR VFTDHMVVVR YVEGKGWHDA EVKARGPLQI
DPASAVLHYA QEIFEGMKAY RLDDGLALFR PEANAARFNL SARRMAMPDV PEELFIEAVE
QLVRIDRDWV PGGGGSLYLR PFMFANEVFL GVKPSSEYLF MVIASSVGAY FKGGKDSVTV
WVSTDYTRAA PGGTGSAKCG GNYAASLLAQ KQATEHGCDQ VVFLDAAERK WIEELGGMNV
FFVMDDGSMV TPPLQGTILP GITRDSIIRL ARDEGIAVRE EPYSYEQWKA DARSGKLVET
FACGTAAVVT AIGTVKGDDG EFTIGAGGTG QTTARLRDRL TGIQRGTVAD PYGWVRRVG
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