Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0778 |
Symbol | |
ID | 5197297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 860026 |
End bp | 861105 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640580322 |
Product | branched-chain amino acid aminotransferase |
Protein accession | YP_001261283 |
Protein GI | 148553701 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
TIGRFAM ID | [TIGR01123] branched-chain amino acid aminotransferase, group II |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTCCC AGTTCACCAT CCTGCCCAAC GCGGCGCCGA CCCCGGCCGA AGACCGCGCC AAGCTGCTGG AAAATCCCGG CTTCGGCCGC GTCTTCACCG ACCATATGGT CGTCGTCCGC TATGTCGAGG GCAAGGGCTG GCACGATGCC GAGGTGAAGG CGCGCGGGCC GCTGCAGATC GATCCGGCGT CGGCGGTGCT CCATTATGCG CAGGAGATCT TCGAGGGGAT GAAGGCCTAT CGCCTGGACG ACGGCCTGGC GCTGTTCCGG CCCGAGGCGA ACGCCGCCCG CTTCAACCTG TCGGCGCGCC GCATGGCGAT GCCCGACGTG CCCGAGGAGC TGTTCATCGA GGCGGTCGAG CAGCTCGTCC GCATCGACCG CGACTGGGTG CCGGGTGGCG GCGGCAGCCT CTACCTGCGC CCGTTCATGT TCGCGAACGA GGTGTTCCTG GGCGTCAAGC CCTCGTCCGA ATATCTGTTC ATGGTGATCG CCTCGTCGGT CGGCGCCTAT TTCAAGGGCG GCAAGGACTC GGTCACCGTC TGGGTCTCGA CCGACTATAC CCGCGCCGCG CCGGGCGGCA CCGGCAGCGC CAAGTGCGGC GGCAACTATG CCGCCAGCCT CCTCGCCCAG AAGCAGGCGA CCGAGCATGG CTGCGACCAG GTCGTCTTCC TCGACGCCGC CGAGCGCAAG TGGATCGAGG AACTGGGCGG CATGAACGTC TTCTTCGTGA TGGACGACGG ATCGATGGTG ACGCCGCCGC TGCAGGGCAC GATCCTGCCC GGCATCACCC GCGACTCGAT CATCCGCCTG GCGCGCGACG AGGGCATCGC GGTCCGCGAG GAGCCCTATT CCTACGAGCA GTGGAAGGCC GACGCCCGCT CGGGCAAGCT GGTCGAGACC TTCGCCTGCG GCACCGCCGC GGTCGTCACC GCGATCGGCA CGGTCAAGGG CGATGACGGC GAGTTCACCA TCGGCGCCGG CGGCACCGGC CAGACCACGG CGCGGTTGCG CGACAGGCTG ACCGGCATCC AGCGCGGCAC CGTCGCCGAC CCCTATGGCT GGGTGCGCCG GGTCGGTTGA
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Protein sequence | MTSQFTILPN AAPTPAEDRA KLLENPGFGR VFTDHMVVVR YVEGKGWHDA EVKARGPLQI DPASAVLHYA QEIFEGMKAY RLDDGLALFR PEANAARFNL SARRMAMPDV PEELFIEAVE QLVRIDRDWV PGGGGSLYLR PFMFANEVFL GVKPSSEYLF MVIASSVGAY FKGGKDSVTV WVSTDYTRAA PGGTGSAKCG GNYAASLLAQ KQATEHGCDQ VVFLDAAERK WIEELGGMNV FFVMDDGSMV TPPLQGTILP GITRDSIIRL ARDEGIAVRE EPYSYEQWKA DARSGKLVET FACGTAAVVT AIGTVKGDDG EFTIGAGGTG QTTARLRDRL TGIQRGTVAD PYGWVRRVG
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