| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0765 |
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| Symbol | |
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| ID | 5199099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 845971 |
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| End bp | 848310 |
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| Gene Length | 2340 bp |
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| Protein Length | 779 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640580309 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001261270 |
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| Protein GI | 148553688 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.367736 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTTGC ACCTTCAGCG GGTGAGTATT TCCCGTCATA GGCAGCGCAC CCGCCCCGAT
GCAGATAGGC TCCGTTCCAA AAAGGTGCCG GCCTGTCGTC GTGGTCCGGC CTATCGGGGA
GAGGCAAGAG TGTTCAAAGA CAGCATCGGG GCGTTCCGTT CGGCGGCCTG CGGCTTCGCG
CTGGCCGTCG CGGGCCTGTC CATGCCCGCT TTCGCGCAGG ACAGGGCGGC ACCGGCCGCC
GACGACGCGG TCGACGAGAT CGTCGTGACC GCGACCCGCC GCGCCGCGAA CGTGCAGGAT
ATCGGCATCG CGGTGACGGC GCTGGGGGGC GACCGTCTGA CCGAACTGGG CCTGCGCAAC
TCGACCGACC TGGCGGCGAT GACGCCGGGC CTGCAGTTCA CCGCGCCGGG CGGCCCGCCG
GTCGCCGGCC TGATCTCGAT CCGCGGCGTC TCGCAGAACG ACTTCGCCGG CCATATCGAG
CCCGCCAACG CCTTCTATGT CGACGAGGTC TATCAGCCCT CCAACGCCAC CAGCGTGCAG
GAGCTGTTCG ACGTCAGCCG GGTCGAGGTG CTGAAGGGGC CGCAGGGCAC GCTGTTCGGC
CGCAACGCGA CCGGCGGCCT GATCCACGTC ATCACCAACC AGCCGACCGA CGAGCTGAGC
GGCTTCGTCG ACGCGACCTA TGGCAGCTAC GACCAGTTCC GGGTCGAGGC GGCGGTCGGC
GGCCCGCTGG GCGAAGGCGT CTCGGCGCGC ATCGCGGTGC TCAAGAACAA GGCCGACGGC
TATATCAAGA ACGACATCGG CTCCGACATC CTGGCCAACG ACACGCTGGC GGCGCGCGGC
CAGGTGAAGA TCGAGCCGAA CGACCGGCTG ACCGTCAACC TGTTCGCCGA CTGGTACAAG
ATCCGCCCGG TCGCGACCGG CGGCGCGATG ATCACCGGCG CGGCGCAGGA CGCGGACGGG
CTCGGCGTGC TGCTGCCGCC TGGCTCGCCG ACCGGCTTCG GCTATGTCGA CGCCGACGGC
GATCCCTATA CCGGCTCGTT CAACTTCGCG GGCCGCTTCA CCCGCGAGAC CTGGACGGTC
GGCGGCAAGA TCAACCTCGA TCTCGGCGGC GGCTATTCGC TTGCGACCGT CACCAGCTAC
CAGAGCCTCG ACAGCGAATA TGCGGCCGAC AACGACTTCT CGCCGATCGA CATCGGCATC
TTCGGGCAGA ACGCCAAGGC CAAGCATTTC ACCCAGGAAA TCCGCCTGAT CGAGGATGAG
GGCGCGTTCC GCTGGACCGC CGGCCTCTAT TACCTCAACA TCAAGGGCGA CTATTTTCAG
GGCTTCAACC TGCCGGCCTT CGGCACCTAT CCGCGCGCCG ACTACAGCGT CGACACCCAA
TCCTACTCGG CCTTCGGGCA GGCGGAATAT GACCTGACCG AGCAGCTCAA GCTGACCGCC
GGTATCCGCG TCACCCGCGA CGAGAAGAAA TATTATTACT CGGAGGTCTG CACCGGCCCG
CTGTGCCCGG CCTTCATCGC GCCGGGATCG CTCGCCTCGG CCGGCGTCAC CACCGACAAG
CATGGCGAGA CCGGCGTCTC GGGCCGCCTC GCGCTCGATT ACAAGCCCAA TAGCGACACA
CTGCTCTATG CGAGCATCAA TCGCGGCTAC AAGGCGTTCA ACTACAATGC CGGCTTCGTC
GGGCAGGCGC CGCTCACCGG CTTCCGCTTC AAGGGCGAGA ACCTGATGGC CTATGAAGTG
GGCGGCAAGT TCGAGTTCTT CGATCGCCGC CTGCGGCTTA ACGGCGCCAC TTATTATTAC
GACTATTCGG ACTATCAGGC GTTCGACCAG CGTGGCTTCA ACTTCACGCT CTTCAACACC
AGCGCGAAGA TGTACGGCGC CGATTTCGAG CTGTCGGCGC GGCCGGGCAT GGGCTTCCAG
TTCGATGCGG GCCTGGCGCT GCTCCACACC AATGTGAAGG GCATCCCGAT CGGCACCCGC
CTGGTCGACC GCAAGGCGCC GCAGTCGCCC GACTATACGA TCAACCTGGC CGCGACGAAG
CGCTTCGACC TCGGCTTCGG CCAGTTGAGC GGCACGATGA ACGCGATCTA CACCGACGAC
TTCTACGCCC AGCTCACCAA TGCGCAGGCG ACCCTGATCA AGGGAAGCTG GCTGGCCAAT
GCGCGGGTGT CGCTGAAGTT CGCCGACAGC GGCTTCGAGC TGGCGGGCTT CGTCAACAAC
CTGTTCGACA AGGCGCGCAA GACCTTCGCC TTCGACGTCT CGGCCCCGCC GCTCGGCGGC
TCCTACGGCA CCTACGCCAC CCCGCGCTGG TTCGGCGTGC AGGCGCGGTA CAGCTTCTGA
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| Protein sequence | MSLHLQRVSI SRHRQRTRPD ADRLRSKKVP ACRRGPAYRG EARVFKDSIG AFRSAACGFA
LAVAGLSMPA FAQDRAAPAA DDAVDEIVVT ATRRAANVQD IGIAVTALGG DRLTELGLRN
STDLAAMTPG LQFTAPGGPP VAGLISIRGV SQNDFAGHIE PANAFYVDEV YQPSNATSVQ
ELFDVSRVEV LKGPQGTLFG RNATGGLIHV ITNQPTDELS GFVDATYGSY DQFRVEAAVG
GPLGEGVSAR IAVLKNKADG YIKNDIGSDI LANDTLAARG QVKIEPNDRL TVNLFADWYK
IRPVATGGAM ITGAAQDADG LGVLLPPGSP TGFGYVDADG DPYTGSFNFA GRFTRETWTV
GGKINLDLGG GYSLATVTSY QSLDSEYAAD NDFSPIDIGI FGQNAKAKHF TQEIRLIEDE
GAFRWTAGLY YLNIKGDYFQ GFNLPAFGTY PRADYSVDTQ SYSAFGQAEY DLTEQLKLTA
GIRVTRDEKK YYYSEVCTGP LCPAFIAPGS LASAGVTTDK HGETGVSGRL ALDYKPNSDT
LLYASINRGY KAFNYNAGFV GQAPLTGFRF KGENLMAYEV GGKFEFFDRR LRLNGATYYY
DYSDYQAFDQ RGFNFTLFNT SAKMYGADFE LSARPGMGFQ FDAGLALLHT NVKGIPIGTR
LVDRKAPQSP DYTINLAATK RFDLGFGQLS GTMNAIYTDD FYAQLTNAQA TLIKGSWLAN
ARVSLKFADS GFELAGFVNN LFDKARKTFA FDVSAPPLGG SYGTYATPRW FGVQARYSF
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