| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0762 |
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| Symbol | |
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| ID | 5198014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 841945 |
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| End bp | 844023 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640580306 |
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| Product | transketolase domain-containing protein |
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| Protein accession | YP_001261267 |
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| Protein GI | 148553685 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
[COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.744175 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.211672 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACCG CCGCGCTCAA GCAGCCGCTC CGCAACGCCC CCGACGATAA TGTCGACTGG
AAGCGCGTCG CCTATCTCGT CCACCTGTCG CGCGCGCTCG ACAAGATGGA GGAGACCCGG
CTCGTTCCCG AGAAGGAGGT GCTCTACCAG TTCTCGGCGC GCGGCCACGA CATGGGGCAG
ATCCTGCTCG GCTGCCGGCT CGACAATCCG CAGGATGCGA GCTGCGGCTA TTATCGTTCG
CGCCCGCTGC TGCTGGCGCT CGGCGTCGAC GTGGCCGACG CGCTCGGCTC GGCGATGGGC
CGCGCGGGCG GCTATTCGGA CGGCCGCGAC ATCGGCGTGG TGTTCAACTT CCCCAACCCC
GACGGCGCCT CGGCCCTGCC GATGTGCGGC GGGGTCGGCG CGCAATACAC GCCGACCGCC
GGCTGGGCGC AGGCGATCGA ATATTACCGC ACCGTCGTGA AGGACCCCGC CTATGACAAG
GCGCTGGCGG TCGTGCTCGG CGGCGACGGA TCGGTCGCGT CGAACGGCTT CTGGGCGGCG
CTGACCATCG CGACGACGCA GAAGCTGCCG ATGCTCTTCT ACATCGAGGA CAACGGCTTC
GGCATCTCGG TGCCCTCGAC CTTCCAGACG CCGGGCGGCA ACATCGCCGC CAATCTGGGG
AGCTGGCAGG GGCTCGAGAT ATTCTCGGGC GACGGCACCG ACCCGGCCGA GGCCGCGCGC
CTCGTTGACG CGGCGACGTC CTATGTCCGC GACCGGCGCG CGCCCGCGAT GCTGCGGCTG
ACCGTGCCGC GCCTCCAGGG CCACAGCTTC CAGGACACCC AGACCTACAA GTCGTCCAAC
GTCGTCGAGG CCGAATGGGC GCGCGATCCG CTGCCCAAGC TCAAGTCCTA CCTGGTCCCC
GCCGTGCTGA GCGAGGCCGA GTGGGACAGG TTGCAGGGCG AGGCGCAGGC CGCCGCCGAA
GCCGCCTGCG AGGAGGCGAA GGCGCGCCCA GTCTCGCAGC CCGAAAGCGT GATGAAGAAC
GTCTTCTTCG AAGGCGAGAT GCAGGCCGAG GGCGGCATGG CGCTGCACGG CTATGTCGCG
CCCGCCGCGA CCGGGGAGCC CAGGCCCGAG GGGCAGCGGA TCAACATGGT GACCGCGATC
CGCCGCACCC TCGACCATGA GCTGTCGATC AACGACAAGG TCGTGCTGTT CGGCGAGGAT
ATCGGGCCGA AGGGCGGCGT CCACGCGGTG ACGCTCGGCC TCCAGGAGAA ATACGGCACG
GAGCGCGTGT TCGACACCTC GCTGTCGGAG GAGGGCATCA TCGGCCGCGC GGTCGGCATG
GCGCTCGCCG GGCTGATGCC GGTGCCGGAG ATCCAGTTCC GCAAATATGC CGAGCCGGCG
ACCGAGCAGA TCAACGATTG CGGCACGATG CGCTGGCGCA CCAACAACCG CTTCGCGGCG
CCGATGGTGG TCCGCATCCC GGGCGGCTTC TTCAAGTGCG GCGATCCCTG GCACAGCCAG
ACCAACGAGG TCGCCTTCGT CCACAATCCG GGCTGGAAGG TCGCGGTGCC GTCCAATGCC
GAGGACGCGG TCGGCCTGCT GCGCGCCTCG CTGCGCGGCA ACGATCCGGT GATCTTCTTC
GAGCATCGCA ACCTGCTCGA CCTCGCCTGG GCGCGGCGGC CCTATCCGGG CGACGATTTC
GTGCTGCCGT TCGGCCAGGC GAAGTTCACC CGGCAGGGCA GCGACATCAC CATCGTCACC
TGGGGCGCGA TGGTGCCGCG CTGCGAGGAT GCGGCCGCGC ATGTCTCGGC CGACGTCATC
GACCTGCGCA CGCTGATGCC GTGGGACCGC GAGGCGGTAC TGGACTCGGT GCGCCGCACC
CGCCGCTGCC TGATCGTGCA CGAGGATCTC CAGACCGCCG GCTTCGGCGC GGAGATCGCG
GCGGTGGTCG CCGACCAGGC GTTCATGGAC CTCGACGCGC CGGTCGCGCG GGTGACGATG
CCCGACATTC CCAGCCCGCA TAATCCGTTG CTGCTCGATT GGGCGGTGCC GTCGGTCGAG
CGCATCCGCG CGAAGATCGA CGAACTGATC GCGTTCTGA
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| Protein sequence | MATAALKQPL RNAPDDNVDW KRVAYLVHLS RALDKMEETR LVPEKEVLYQ FSARGHDMGQ
ILLGCRLDNP QDASCGYYRS RPLLLALGVD VADALGSAMG RAGGYSDGRD IGVVFNFPNP
DGASALPMCG GVGAQYTPTA GWAQAIEYYR TVVKDPAYDK ALAVVLGGDG SVASNGFWAA
LTIATTQKLP MLFYIEDNGF GISVPSTFQT PGGNIAANLG SWQGLEIFSG DGTDPAEAAR
LVDAATSYVR DRRAPAMLRL TVPRLQGHSF QDTQTYKSSN VVEAEWARDP LPKLKSYLVP
AVLSEAEWDR LQGEAQAAAE AACEEAKARP VSQPESVMKN VFFEGEMQAE GGMALHGYVA
PAATGEPRPE GQRINMVTAI RRTLDHELSI NDKVVLFGED IGPKGGVHAV TLGLQEKYGT
ERVFDTSLSE EGIIGRAVGM ALAGLMPVPE IQFRKYAEPA TEQINDCGTM RWRTNNRFAA
PMVVRIPGGF FKCGDPWHSQ TNEVAFVHNP GWKVAVPSNA EDAVGLLRAS LRGNDPVIFF
EHRNLLDLAW ARRPYPGDDF VLPFGQAKFT RQGSDITIVT WGAMVPRCED AAAHVSADVI
DLRTLMPWDR EAVLDSVRRT RRCLIVHEDL QTAGFGAEIA AVVADQAFMD LDAPVARVTM
PDIPSPHNPL LLDWAVPSVE RIRAKIDELI AF
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