Gene Swit_0758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0758 
Symbol 
ID5197792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp838020 
End bp838799 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content73% 
IMG OID640580302 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001261263 
Protein GI148553681 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.229478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.176776 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGATC CCCGCACCCT GATCGTCGAG CGCCGCGCCG GGGGCGTGGT GCTGATCCGC 
CTCAACCATC CCGAACGGCG CAATGCGCTG GCGACCCCGC TGCTGCGCGC CGTCGCCGAC
GAGATCAATG CGGCCGAAGG CGACAAGGAC GTGCGCGTGG TGGTGATCAC CGGCAGCGAC
ACGCTGTTCG CCGCGGGCGC CGACATCGAC GAACTGCTCG CGAGCGGGGC CGGCGATCCG
ATCGAGACGC CGCGCTACAT CGCCTGGGCG GCGATCCGCT CCTTCTCGAA GCCGCTCGTC
GCCGCGGTCG AGGGCTGGTG CCTCGGCGCG GGGGCGGAGC TGATGATGTG CGCCGACATC
GTCGTCGCGG CGAAGGGCGC GAAGATCGGC CAGCCCGAAA CCAACCTGGG CATCATCCCG
GGCGCAGGCG GCACCGCCAC CCTGCCCCGC CGCATCGGCC AGGCGCGGGC TATGCACATG
GTGCTGACCG GCGAGCCGAT CGGCGCGGAG GAGGCGCATG CGATCGGCCT GGTCGCCTGC
CTCGCCGAAC AGGGACAGGC GCTCGACGAC GCGCTGGCGC TGGCGGCCAA GCTGGCGATG
CGCGCGCCGC TCGCGCTGCG CGCCGCCAAG GCGAGCATCC GCGACGCCGA GCATCTCGAC
GAGGCCGCGC ATCTGCGCAG CGAGCGGGTC CGCTTCCTCA AGCTGCTCGG CACCGCCGAC
AAGGCCGAGG GCATCACCGC CTTCCGCGAG AAGCGCCGGC CCGACTGGCA GGGCAGATAG
 
Protein sequence
MPDPRTLIVE RRAGGVVLIR LNHPERRNAL ATPLLRAVAD EINAAEGDKD VRVVVITGSD 
TLFAAGADID ELLASGAGDP IETPRYIAWA AIRSFSKPLV AAVEGWCLGA GAELMMCADI
VVAAKGAKIG QPETNLGIIP GAGGTATLPR RIGQARAMHM VLTGEPIGAE EAHAIGLVAC
LAEQGQALDD ALALAAKLAM RAPLALRAAK ASIRDAEHLD EAAHLRSERV RFLKLLGTAD
KAEGITAFRE KRRPDWQGR