| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0752 |
|---|
| Symbol | |
|---|
| ID | 5197924 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 833018 |
|---|
| End bp | 834217 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640580296 |
|---|
| Product | beta-ketoadipyl CoA thiolase |
|---|
| Protein accession | YP_001261257 |
|---|
| Protein GI | 148553675 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02430] beta-ketoadipyl CoA thiolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.842768 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.454095 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGACG CCTATATCTG CGACGCGGCA CGTACCCCGA TCGGCCGTTA TGGCGGCAGC
CTCGCGGCCG TCCGCGCCGA CGACCTCGCC GCGATCCCGA TGCGGGTGCT GCGCGAGCGC
AACCCGGGGA TCGTCGGCCA TATCGACGAC ATATTGTTCG GCTGCGCCAA CCAGGCGGGC
GAGGACAACC GCAACGTCGC GCGCATGGCG GCGCTGCTGT CGGGCCTGGG CGAGGACGCG
CCGGGCACGA CGATCAACCG GCTGTGCGGA TCGGGCATGG ACGCGGTCGC CTATGCGGCC
CGCGCGATCA AGGCCGGCGA GGCCGACCTG ATCGTCGCCG GCGGCGTCGA GAGCATGTCG
CGCGCGCCCT TCGTCATGCC GAAGGCCGAC GGCGCCTTCT CGCGCAGCAA CGCGGTCTAC
GACACCACGA TCGGCTGGCG CTTCGTCAAC AAGCTGATGA AGGAGCGGTT CGGCATCGAC
TCGATGCCCG AGACCGCCGA GAATGTCGCG CAGGACTTCC AGGTCAGCCG CGAGGACCAG
GACCGTTTCG CCGTCGAGAG CCAGCGCCGC GCCGCCGCGG CGCAGGCCAA TGGCCGCCTC
GCCGCCGAGA TCGTCCCCGT GACCATCCCG CAGCGCAAGG GCGATCCCAT CGTCGTCGAC
CGCGACGAGC ATCCGCGCGA GACCTCGATG GAGGCGCTCG GCAAGCTCAA GCCGATCGTC
CGCGCCGACG GCACGATCAC CGCCGGCAAC GCCAGCGGCG TCAACGACGG CGCCGCCGCG
ATCATCGTCG CCAGCAAGGC GGCGGTCGAG GCCTATGGCC TGACCCCGCG CGCCAAGGTG
CTGGGCGGCG CGGTGGCGGG CGTGCCGCCG CGCATCATGG GCATCGGCCC GGCCCCGGCC
AGCAAGAAGC TGCTCGAGCG GCTCGGCATC GGCATCGGCG CGATCGACGT GGTCGAGCTC
AACGAGGCGT TCGCCAGCCA GGGCCTCGCC GTGCTCCGCC AGCTCGGCCT GCCCGACGAC
GCGGCGCATG TGAACCCGAA CGGCGGCGCG ATCGCGCTCG GCCACCCGCT CGGCATGTCG
GGCGCGCGGC TGGTGCTGAC CGCGACCGAG GAACTGGTCC GCAGCGGCGC CGGCAAGGCG
CTCTGCACCA TGTGCATCGG CGTCGGCCAG GGCATCGCGC TGGCGATCGA ACGGGTGTGA
|
|---|
| Protein sequence | MADAYICDAA RTPIGRYGGS LAAVRADDLA AIPMRVLRER NPGIVGHIDD ILFGCANQAG
EDNRNVARMA ALLSGLGEDA PGTTINRLCG SGMDAVAYAA RAIKAGEADL IVAGGVESMS
RAPFVMPKAD GAFSRSNAVY DTTIGWRFVN KLMKERFGID SMPETAENVA QDFQVSREDQ
DRFAVESQRR AAAAQANGRL AAEIVPVTIP QRKGDPIVVD RDEHPRETSM EALGKLKPIV
RADGTITAGN ASGVNDGAAA IIVASKAAVE AYGLTPRAKV LGGAVAGVPP RIMGIGPAPA
SKKLLERLGI GIGAIDVVEL NEAFASQGLA VLRQLGLPDD AAHVNPNGGA IALGHPLGMS
GARLVLTATE ELVRSGAGKA LCTMCIGVGQ GIALAIERV
|
|---|
| |