| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0750 |
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| Symbol | |
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| ID | 5197922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 831110 |
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| End bp | 832579 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640580294 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase |
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| Protein accession | YP_001261255 |
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| Protein GI | 148553673 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.503144 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.47859 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATCG GAACGGACGG CATCATCGCA GTGGTCGGCG CGGGCACGAT GGGCGCGGGG
ATCGCGCTGG TCGCGGCGCA GGCCGGCCAT GCGGTGCGGG TGATCGACAC CCAGGACGCG
GCGCTCGACC GCGGGCGGCA AAGCGTCGCC CGGTCGCTCG CCTCGCTGGT CAAGCGCGGC
ACGATCGACG AGGCGGGCGC CGCCGCGATC GCCGAACGGA TCGGCTGGAG CACCGACGTC
GCCGACGCCG CCCCCGCCGC GCTCGCGATC GAGGCGATCG TCGAGCGGAT GGACGTCAAG
ACCGGCCTGT TCGAGACGCT CGCCCGCCAT GTCGCGCCCG GCGCGATCCT GGCCAGCAAC
ACCTCCTCGC TGTCGATCGA GGCGATGGCC AGCGCGGTGC CGGGGCCCGA GCGCTTCGCC
GGCCTCCATT TCTTCAACCC CGTGCCGGCG ATGAAGCTGG TCGAGCTGAT CCCCTCGTCG
CGCACCGCGC CGACGGTGGT CGACGATCTC GAAGCGCTGA TGCGCGCGTG GAAGAAGCTG
CCGGTCCGCG TCCGCGACGT GCCCGGCTTC ATCGTCAACC GGGTCGCCCG GCCCTATTAT
GCCGAGGGCT TCGCCGCGCT CGGCGAGGGC GTCGATCCGG CGACGATCGA CCAGGCGCTG
GAAAGCGCGG GCGGCTTCCG CATGGGGCCG CTGACCCTGG CCGACCTGAT CGGCCACGAC
GTCAACTACA CCGTCGCCTG CCAGGTGTTC GACGGCTATG CCGGCAAGAC CCGCTTCCGC
CCGCAGCCGA GCCAGCAGGC GCTCCACGAT GCCGGACATC TCGGCCGCAA GAGCGGGCGC
GGCGTCTATG ATTATGGCGC CGACCTCCCC GCCCCGCCCT TCGTCGCCCC CGCCGCCCCG
CCGCGCAGCA TCGAGGCCGG CGCCGACGCG GGCGATCTCG AACCGCTCGT CGCGCTGGCC
GAGGCGGCCG GCGGCGCCGT CGCGCGCAGC GCCGACCTCG CCCCCGGCCT GCTGCGAATC
GACGGCCGGC TGCTGGCGAC GGGCGACGGC CGCCGCCTCG CCGACCGCGC CGATGCCGAC
ATGCTGCTCG ACGCGGCGCG CGACTATGCC GCGACGCCGA CCCTGGTCGT CACCGCGCGC
GACGCGGCGG CGCTGGCGCT CGCCGCCGGC TTCGCCGGGC TGATCGGCAA GCGGGTGCTG
GCGCTGCCCG ACCGGCCCGG CCAGATCGTG CTGCGGACGC TCGCCCAGCT CGCCAATGCG
GGCTTCGACG CGCTCGACGA CGACGTCGCC GACGCCGCCG GGGTCGATAC GGCGATGCGC
TACGGCGCCA ACCATCCGCA GGGCCCGATC GAATGGGCCG GGCGCTTCGG CACCGCCCGG
CTCGCCGCCG TGCTCGCCAC CATCGCCGCC GCCACCGGCG ATCCGATCTA CGCCCCCTCC
CCCTCGATCG CCGTCGCGGA GCCCGCATGA
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| Protein sequence | MTIGTDGIIA VVGAGTMGAG IALVAAQAGH AVRVIDTQDA ALDRGRQSVA RSLASLVKRG
TIDEAGAAAI AERIGWSTDV ADAAPAALAI EAIVERMDVK TGLFETLARH VAPGAILASN
TSSLSIEAMA SAVPGPERFA GLHFFNPVPA MKLVELIPSS RTAPTVVDDL EALMRAWKKL
PVRVRDVPGF IVNRVARPYY AEGFAALGEG VDPATIDQAL ESAGGFRMGP LTLADLIGHD
VNYTVACQVF DGYAGKTRFR PQPSQQALHD AGHLGRKSGR GVYDYGADLP APPFVAPAAP
PRSIEAGADA GDLEPLVALA EAAGGAVARS ADLAPGLLRI DGRLLATGDG RRLADRADAD
MLLDAARDYA ATPTLVVTAR DAAALALAAG FAGLIGKRVL ALPDRPGQIV LRTLAQLANA
GFDALDDDVA DAAGVDTAMR YGANHPQGPI EWAGRFGTAR LAAVLATIAA ATGDPIYAPS
PSIAVAEPA
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