Gene Swit_0747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0747 
Symbol 
ID5198089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp827543 
End bp828019 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content69% 
IMG OID640580291 
ProductMarR family transcriptional regulator 
Protein accessionYP_001261252 
Protein GI148553670 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.618576 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGA AGCATGACAA GAAGGCCCCG GTCCGCGACG AGCGGTTCAA CTACCGGAGC 
TGGCCCTTCT ACTGGATCGC CCGGGCGAGC GGGCGCTATC GCGGCCGGAT GGAGGAGATG
CTGCGCGGTA CGACGCTCGA CATGCCGCGC TGGCGGGTGC TGATGACGCT CCATCAGGAC
CGGGTCGCCA GCGTCAGCGA GATCGCCGCG CATTCGAGCG AGAAGCTGCC GACGATGACG
CGGATCATCC AGCGGATGGA AGCCGACGGA CTCGTCCGCC GCCGCCCCCG GCCGGGCCGC
GAACATGTCA TGGAAGTGGT GCTGACCGAC GCGGGCGAGG TCGCCGGCAA CGAGGCCTGG
GCCTGCGCCG ATTCGATCTA CGGCCAGGCC TTCGCCGGGA TGACCGACGC CGAGCTGGAA
CAACTCACCG GCCTGCTCCA GCGGGTGGCG GAGAATCTGA AGGCGTCGGG GGAGTAA
 
Protein sequence
MTAKHDKKAP VRDERFNYRS WPFYWIARAS GRYRGRMEEM LRGTTLDMPR WRVLMTLHQD 
RVASVSEIAA HSSEKLPTMT RIIQRMEADG LVRRRPRPGR EHVMEVVLTD AGEVAGNEAW
ACADSIYGQA FAGMTDAELE QLTGLLQRVA ENLKASGE