| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0740 |
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| Symbol | |
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| ID | 5199184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 821725 |
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| End bp | 822480 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640580284 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001261245 |
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| Protein GI | 148553663 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.25904 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAGG GCAACGGCGG CGACGTCGTC CTCGTCACCG GCGGCGCGAG CGGCCTGGGC
GCGGCGATCG CGCGCGGGAT GCACGAGCGC GGCTTCCGGG TCGGCATCGG CGATCTCGAT
GCCGCCGCCG CTTCGGCGCT GGCGGCCGAG CTCGACCCGA GCGGGGCGAC CGCGATCGGC
ATCGCCCTCG ACGTGCGCGA GCAGGCCTCG TTCGAGGCGG CCCGCGACGC GCTGACGGCG
CGCTGGGGAT CCGTCGAAGG GCTGGTCAAC AACGCCGCCG CCACCGCCGC CAGGCCGGTG
CTCGACATCA CCCCCGACGA GTTCGACGCG GTGATGGCGG TCAACGCGCG CGGCACCTTC
GTCGGGTCGC AGGTGTTCGG CCGGGTGTTC AAGGCGCAGG GCTATGGCCG CATCGTCAAC
CTCGCCTCGC TCGCGGGGCA GAATGGCGGG ACGGCGACGG GCGCGCATTA TGCCGCGTCG
AAGGGCGCGA TCCTGACCCT GACCAAGGTG TTCGCGCGCG ACCTCGCCGC CTTCGGCGTC
ACCGCCAACG CGATCGCGCC GGGGCCGCTC GATTCGCCGA TGGTCCACCG CACCATCTCC
GAAGAGGCGA TGCCGCGCTT CCTGGAGAAT ATCCCGGTCC GCCAGCTCGG CACGCCCGCC
TTCATCGCCG ACATCGCCGC GCGCCTGTGC GCCCGCGACG CCGGCTTCGT GACCGGCGCC
ACCTGGGACA TCAATGGCGG CCTCTTCATG CGCTGA
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| Protein sequence | MTQGNGGDVV LVTGGASGLG AAIARGMHER GFRVGIGDLD AAAASALAAE LDPSGATAIG
IALDVREQAS FEAARDALTA RWGSVEGLVN NAAATAARPV LDITPDEFDA VMAVNARGTF
VGSQVFGRVF KAQGYGRIVN LASLAGQNGG TATGAHYAAS KGAILTLTKV FARDLAAFGV
TANAIAPGPL DSPMVHRTIS EEAMPRFLEN IPVRQLGTPA FIADIAARLC ARDAGFVTGA
TWDINGGLFM R
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