| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0730 |
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| Symbol | |
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| ID | 5200212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 808385 |
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| End bp | 810670 |
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| Gene Length | 2286 bp |
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| Protein Length | 761 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640580274 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001261235 |
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| Protein GI | 148553653 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.455478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0840976 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATATCTA CAGCTTGGAC CAAGCGCCGC CTCCTGTCCT CGGCGATGAT CGCCGCCGCG
CTGTGCGGGG TCAGCCAGGA AGCGCTCGCG CAGGGCGCCT CGACCGAAGG CGAGAATGAG
CTGGAGGTGA TCACCGTCAC CGCCCGCCGC CAGACCGAGA ACCTCCAGAG CACGCCGATC
TCGATCACCG CCTTCTCGGG CGACCGGCTC GAGGCGCAGG GCATCACCCA GGTCAACCGC
ATCCAGGACT TCACGCCGAA CCTGACCTTC GCCAACATCC CGTCGAACAG CGGCATCGCG
TCGAACGCGG CCGTCTACAT CCGCGGCATC GGACAGAACG ACTTCGCGCC GACCGTCGAG
CCGGGCGTCG GCATCTATAT CGACGGCGTC TATCTGGGCC GCACCGCCGG CGGCGTGTTC
GACCTGATCG ACGTCAACTC GGTCGAGGTA CTGCGCGGGC CGCAGGGCAC GCTGTTCGGC
CGCAACACGA TCGGCGGCGC GATCAACCTG ACGACGGTCC AGCCGAGCGA CGAGTTCAAG
CTGAAGGCCG ACATCAAATA CGGCACCGAC GACCGGATCA ACGTGCGCGG CATGGTCAGC
GGCCCGATCG CCGAGGGCAT CTACGCCAAG GTCAGCGGCG GCCTCTTCTC GCAGGACGGC
TATGTGAAGG CGCCGGGGCT CGGCAAGAAG CTGGGCAACC AGGACACCAA GATGATCCGC
GGCGCGCTGC GCATCGCGCC GGTCGACAGC CGGTTCGAGG CGACGATCGC CGGCGACTAT
ACCCGCGACA AGAGCAACGG CGCGCCGGTC ACCATCTCGG GCATCGATCC GACCGCGACC
GGCAGCTTCG TGACGTTGCA GAACGTCATC GCGACCGGCC TGGGCAATCC GGCCGACTGC
CTGACCCCGG CGGCTGCGGC CAACACCCAG TGCTACAACC AGCGCCTCTT CTCGAAGGAC
ACCAACTATT CGACCGGGCC GACCTTCTCG GACCTCGAGC TGTGGTCGGC GTCGCTGACC
GCCTCCTATG ACCTGACCGA CGAGATGCAG ATCAAGTCGA TCACCGCGAT CCGTCGCATC
AACGGCACCT TCGCGCAGGA CCGCGACGGA TCGAACCTGC CGATCAACCA TGTCTATGAC
GACTTCACCC AGAAGCAGTT CAGCCAGGAA TTCCAGTTCA CCGGCAAGGC GTTCGACGAC
CGGCTCAACT GGGTCACCGG CCTCTATTTC TTCAAGGAGA AGGGCAAGGA CCTCAACTCG
ATCGACTTCC TCGTCGTGTC GGCGGAATCG GGCGGCTATT ACGACTACAA GAACTGGGCC
GCCTTCGCGC AGCTCGGCTA CAAGCTCACC GACAAGCTGA CCCTGACCGG CGGCCTGCGC
TACACGCAGG ACCGCAAGGA CTATCTGCCC GACCAGTTCG TGAAGTCGAC GCTGGCGCCG
TTCCTGGTGA TCCCGCCCGG CACCCGGATC GTGCCGCTCC AGACGGTCAA GGCCGACGTC
AACAAATGGA CGCCGATGGT CAACCTGTCC TACCAGGCGA CGCGCGACTT CATGCTCTAT
GCGACCTATT CGCAGGGCTT CAAGAGCGGT GGCTATACCC AGCGCATCTT CCCGCCCGAG
CCGAGCCTGC CGAACTTCAA GCCCGAGACG GTCGACTCCT ACGAAGCCGG CTTCAAGCTG
ATGGCGCTCG ACAACCGTCT GCGCCTGAAC GGCGCCGCCT TCTACACCGA TTACAAGGAC
ATGCAGCTTC TGGTGGCGGA TGCGACCCGG GTCGGGCCGT TCATCACCAA CGCCGGCAAG
GCGCGCATCC AGGGCTTCGA GCTGGAGACC AACTTCGCGC CCGGCGACGG CTGGCGCCTG
AACGCGGCGG TCGGCCTGAC CGACGCCAAG TTCAAGCAGC TCGACGCCGG CGTCCAGGGC
CTGACCCTCG ACTCCAAGTT CGTCTACGTC TCGAAATGGA CGGTCAGCGC GTCGGGCGAG
AAGGAGATCG GCCTGGGCGA CAACGGCTCG CTCACGCCGC ATGTCGACTG GTCGTACCGG
TCGGGCTTCT TCACCAACGC CAACGGCATC AACAACCCCG AACTCTACCA GCCGGGCTAC
AGCGTCTTCA ACGGCAACGT CCGCTGGCAG AGCGACAGCA AGACCTTCTC GCTGACCTTC
GGGGTCGACA ACATCGCCGA CAAGAAGTTC CGCACGTTCG GCGATTACCA GCCGTCCTTC
GGCTTCTTCA TGCAGGCCTA TGATCGCGGC CGGCAATATT ATGTGAAGGC CGGCTTCTCC
CTCTGA
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| Protein sequence | MISTAWTKRR LLSSAMIAAA LCGVSQEALA QGASTEGENE LEVITVTARR QTENLQSTPI
SITAFSGDRL EAQGITQVNR IQDFTPNLTF ANIPSNSGIA SNAAVYIRGI GQNDFAPTVE
PGVGIYIDGV YLGRTAGGVF DLIDVNSVEV LRGPQGTLFG RNTIGGAINL TTVQPSDEFK
LKADIKYGTD DRINVRGMVS GPIAEGIYAK VSGGLFSQDG YVKAPGLGKK LGNQDTKMIR
GALRIAPVDS RFEATIAGDY TRDKSNGAPV TISGIDPTAT GSFVTLQNVI ATGLGNPADC
LTPAAAANTQ CYNQRLFSKD TNYSTGPTFS DLELWSASLT ASYDLTDEMQ IKSITAIRRI
NGTFAQDRDG SNLPINHVYD DFTQKQFSQE FQFTGKAFDD RLNWVTGLYF FKEKGKDLNS
IDFLVVSAES GGYYDYKNWA AFAQLGYKLT DKLTLTGGLR YTQDRKDYLP DQFVKSTLAP
FLVIPPGTRI VPLQTVKADV NKWTPMVNLS YQATRDFMLY ATYSQGFKSG GYTQRIFPPE
PSLPNFKPET VDSYEAGFKL MALDNRLRLN GAAFYTDYKD MQLLVADATR VGPFITNAGK
ARIQGFELET NFAPGDGWRL NAAVGLTDAK FKQLDAGVQG LTLDSKFVYV SKWTVSASGE
KEIGLGDNGS LTPHVDWSYR SGFFTNANGI NNPELYQPGY SVFNGNVRWQ SDSKTFSLTF
GVDNIADKKF RTFGDYQPSF GFFMQAYDRG RQYYVKAGFS L
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