Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0729 |
Symbol | |
ID | 5198959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 807858 |
End bp | 808367 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640580273 |
Product | hypothetical protein |
Protein accession | YP_001261234 |
Protein GI | 148553652 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.292767 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0621223 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCAGCC TTTCCATGAC GCGGCGGGGG GCGGTGCGCG GCATCGCCCT CGCGGCCACC ATCCCGTTCG CCTGCGGCCG GGCGATCGGG GCCACCGTGG CGGCGGCCGA CCGGCGGACG GCGACCACCG CCGCGCTGCT GCGGACCGCC TTTCCGCATG GCCGGCTGAC GCCGGACTTC TATCGCGGCG TCGCGGAAAC CTATCTCGGG GAGATCGCGG CGAAGCCCGC CGCGGTCGCC GAGCACGACC GGGGGCTGGC GCTGCTCGAC GGCAACCACA TCGCCGCCTT CGCCGACCTG CCGGCGGTGA TCCGGAAGGG CCTGGTCGAG AAGATCGACC AGGAGCCCTT CTTCAAGGCG ATCCTCTGGC GCGGCGCGGA GCTGATCTAC CGCGACCGAT CGGTGTGGAA GATGGTCGGC TATGAGGGCT CGTCGCTCGA ATATGGCGGC TATCACGACC GCGGCTTCGA CGATATCGAC TGGCTGCCCA AGGCGGGAGG GCGGGCATGA
|
Protein sequence | MTSLSMTRRG AVRGIALAAT IPFACGRAIG ATVAAADRRT ATTAALLRTA FPHGRLTPDF YRGVAETYLG EIAAKPAAVA EHDRGLALLD GNHIAAFADL PAVIRKGLVE KIDQEPFFKA ILWRGAELIY RDRSVWKMVG YEGSSLEYGG YHDRGFDDID WLPKAGGRA
|
| |