| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0728 |
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| Symbol | |
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| ID | 5198958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 806305 |
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| End bp | 807861 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640580272 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001261233 |
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| Protein GI | 148553651 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.568898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0737373 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCGC GCTTCAACCT CGACGACGGC TCGGTCTTCG TCGTCATCGG ATCGGGCGCG
GGCGGCGGCA CGCTGTCGAA CGAGCTGGCG CAGAAGGGTC ACAAGGTCGT CTGCCTGGAG
GCGGGCCCGC GCCTGTCGCT GACCGACGTG GTCAACGACG AAGCGGTGAT GTTCGAGAAG
CTCACCTGGC TCGACCGCCG CATGGCGACC GGCAAGCCCG ATCCCAATTT CCCGGTCTGG
GGCTGCAAGA CGGTCGGCGG CACCACCATG CACTGGACCG GCGCCTGCCC GCGCATCGAG
CCTTATGAGA TGCGGGCGCT GTCGACCTAC GGCCCGCTGC CCGACACGAC GCTGGTCGAC
TGGCCGGTGA CGCCCGAGGA GATCGCGCCC TGGTATGACA AGGCCGAGAT CCGCATGGGC
GTGACCGGCA AGCACGGGCT GCCCTTCCTG CCGGCGGGCA ACAATACCAA GGTGCTCGAA
GCCGGCGCGC GGATGTGCGG CTATACGGAC ATCGACACGC ACAACATGGC GATCAACTCG
GTCCCGCGCG ACGATCGGCC GCCATGCCAG CAGCTTGGCT TCTGCACCTC GGGCTGCGCG
GTCGGCGCCA AATGGTCGAC CCTCTACACC GAGATACCGA AGGCCGAGGA GACCGGCCGG
TTCGAGCTGC GCCCGGAATC GATGGTCACC GGGGTCAATC TCGGCGCCGA TGGCCGGGTC
GAGAGCGTCA CCTATCTGAA CAAGGGCCGG ACGGTCACGC AGAAGTGCCG CGCCGTCTCG
GTCGCCGGCA ACGTCGTCGA GACGACCCGC CTGCTGCTCA ACAACCGCAG CGCGCGTTTC
CCCAACGGCC TCGCCAATGG CAGCGGCCTC GTCGGCCGCA ACTATATGCG CCACTTCACC
ATCCAGGTGA TGGGGGTGAT GCCGGGCAAG GTGAACTTCC ACCGCCAGAC CCACCTGGCC
GGCGTCGTCC GCGACGAGCG GACCCACAAG CCCGAACGTG GTTTCGTCGG CGGCTTCCTG
ATCAGCACCG TTCCGTTCAC GCCGGAAATC CTGGCGAAGA ACATGATGAT CGGCGGCTGG
GGCGAGGACC TGACCTCGGT GCTCGACAAA TATGATCATC TCGCGGGGCT GCTGCTGACC
GGCGAGGACC CGCCGCAGCT CTCGAACGGC ATCACCCTGC ACCCGACCGA GCGCGACGGC
TACGGCCTGC CGGTGCCGGT GATCCATTAT GAGGATCACC CCAACACCAT CGCGATGAAG
ACCTATGCCT GGAAGGTCGG CCGCAGGATC TACGAGGCGC TGGGCGCCGA GAAGATCGTC
GAGATGGGCG ACTTCATCCC CGCCACCCAC AATATGGGCA CGGCGCGGAT GGGCACCGAT
CCGAAGGCCA GCGTCTGCAC GCCCTATGGC CGCACCCACG ACGTCGCGAA CCTGTTCGTC
TCGGACGGCA GCCTGTTCCC GACCGCGGCC GGCTGCAACC CGACCCTGAC GATCGTCGCG
CTCGCCCTGC GCCAGGCCGA GCATATCGAC GGGGAGATAC GGGCGGGCCG GCTCTGA
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| Protein sequence | MSARFNLDDG SVFVVIGSGA GGGTLSNELA QKGHKVVCLE AGPRLSLTDV VNDEAVMFEK
LTWLDRRMAT GKPDPNFPVW GCKTVGGTTM HWTGACPRIE PYEMRALSTY GPLPDTTLVD
WPVTPEEIAP WYDKAEIRMG VTGKHGLPFL PAGNNTKVLE AGARMCGYTD IDTHNMAINS
VPRDDRPPCQ QLGFCTSGCA VGAKWSTLYT EIPKAEETGR FELRPESMVT GVNLGADGRV
ESVTYLNKGR TVTQKCRAVS VAGNVVETTR LLLNNRSARF PNGLANGSGL VGRNYMRHFT
IQVMGVMPGK VNFHRQTHLA GVVRDERTHK PERGFVGGFL ISTVPFTPEI LAKNMMIGGW
GEDLTSVLDK YDHLAGLLLT GEDPPQLSNG ITLHPTERDG YGLPVPVIHY EDHPNTIAMK
TYAWKVGRRI YEALGAEKIV EMGDFIPATH NMGTARMGTD PKASVCTPYG RTHDVANLFV
SDGSLFPTAA GCNPTLTIVA LALRQAEHID GEIRAGRL
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