Gene Swit_0726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0726 
Symbol 
ID5198956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp804753 
End bp805241 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content69% 
IMG OID640580270 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001261231 
Protein GI148553649 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.782638 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0301891 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGCA GATCATCTTC GCCAGCGCGC CTGCTCGACG CCTTCGACCT GGCGATCCTC 
CGCATCGTCC AGCGCGACAA CAAGCTGCCG CAGCGGACGA TCGCCGAGGC GGTCAACCTC
TCGACCGCCG CGGTGCAGCG GCGGATCGCG GCGATGGAGG CGGCCGGGGT CATCACCCGC
AACGTCGCGA TCGTCGATCC CGACGCGGTC CGGCTGGCGA TCACCGCGAT CGTCGAGGTC
CACCTCCGCG ACGAGCAGGC GGCGACCGTC GACGAGGCCA AGGCGCTGTT CCGCGCCGCG
CCCGAGGTCC AGCAATGCTA TTATACGACG GGCGGCACCA GCTTCGTGCT GATCATCGTC
ACCCCGGACA TGCGCGCCTA TGACGCGCTG ACCCGCCGCC TCTTCTCCGA GAACGACTGC
GTCGAGCGCT TCCGCACCCT GGTCGCGCTC GACCGGGTCA AGGCCGACAC GGCGATCGTC
ATTCCTTAG
 
Protein sequence
MAGRSSSPAR LLDAFDLAIL RIVQRDNKLP QRTIAEAVNL STAAVQRRIA AMEAAGVITR 
NVAIVDPDAV RLAITAIVEV HLRDEQAATV DEAKALFRAA PEVQQCYYTT GGTSFVLIIV
TPDMRAYDAL TRRLFSENDC VERFRTLVAL DRVKADTAIV IP