| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0725 |
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| Symbol | |
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| ID | 5198955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 802131 |
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| End bp | 804503 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640580269 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001261230 |
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| Protein GI | 148553648 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0453465 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGGG GAATTGGGAT ATTGTCGGCT TCGGCCGCCA CGCTGGCCGT GTTCGCGCCG
GGTGCCGGCC ATGCGCAGGA CGCGGCGGGG CCCGTCGTCG CCAGCGGCCT CGAGGAGATC
ACCGTCACCG CCCGCCGGCG CGCGGAGAAT ATCCAGTCGG CGCCGCTCTC GGTCTCCGCG
TTCAGCAGCG CCGCGCTCGA GGAGCGCAAC GTCCAGAGCT CGTCCGACAT CACCAGCTTC
GTGCCGAACG TGCAGTTCGA CAGCGCGGCG AGCGAGTCCG GCGGCGGCGC GTCGAGCCAG
ATCTCGATCC GCGGCATCGG CCAGACCGAC TATGTGCTGA CCGTCGAGCC GGCGGTCGGC
GTCTATCTGG ACGGCGTCTA TATCGGCAAG TCGATGGGCT CGCTGCTCGA CGCGGTCGAC
ATCGATCGGC TGGAGGTGCT GCGCGGCCCG CAGGGGACGC TGTTCGGCAA GAACACGATC
GGCGGCGCGA TCCAGCTCAT CTCGAAGCGG CCGACCGACA CGCTCGAAGG CTATGGCGAG
CTGACCAGCG GCAGCTACAG CCGCTTCGAC GCCAAGGGCG CGATCTCGGG CCCGCTCAGC
GACACCGTCC GCGCGCGCCT GTCGGGCGCC TATCAGAGCC GCCACGGCTT CGTGAAGCGC
GTCACCGAGA CCGGCCAGGA CACCGGCGAC CGGCAGGGCA ATGTCGACCG GCTGAGCGGC
CGCCTCGCGA TCGAGGCCGA CCTGACCTCC AGCCTCACCG CGACGCTGAC CTTCGACGGC
ACCCGCATCC GCGAGCAGTC GCCGGGCCAG ATACTGGTCA AGGCCGACGA AGGCGCGGCC
TTCTCGGGCG CCTATAATGC CGGCGTGCCC GGCGGCGTCT GCCTGCCGGG GGCCGGCGCC
AGCCGGTTCG CCAACCCCTA TTGCTACAAC AGCCAGTGGG TCCGCCCGCT CAAGTCGCTG
GAGACCACCA ACAGCGGCCC CAACTATGCC GACACCGACG TCTATGGCGC GGGGCTGAAC
CTCGAATGGA AGCTCGGCGG CGCGACGCTC AAGTCGATCA CCGCCTGGCG CAAGGTGAAG
GTCGACATCG CGCAGGACAT CACCGGCTCG CCGCACTATC TCAACTTCAT CGAGCAGCAC
ATCAAGACCG AGCAGTTCAG CCAGGAGTTC CAGCTCCTCG GCGATCTCGC CGACGACAAG
CTGCACTATG TGCTCGGCCT CTATTACCTG CACGAGAGCG GCACCCAGCT CTTCCCGGTG
CAGCTCACGC TCGTCCAGTT CCTGTCGGGC GGCAAGATCC GCAACGACAG CTATGCGGGC
TTCGGCCAGG TCACCTATGA CCTGACCGAC CAGTTCTCGA TCACCGGCGG CCTGCGCTAT
TCGGACGAGA CGCGGCGCTT CAATCCGGGC GTGCAGGTGC TCCAGGGCTA TGCCGCGCAG
ACCGACGTGC CGGGCTTCGT CAACCTGTTC GCCGGCGCGG TCGGCCCGGC CGGCACGCCG
CTCTTCCCGG CCGGCTGGTA TTCGCGCGGG TCGAAGTCGA CGACGCCGAT GGTCTCGGCC
AACTACAAGT TCAACCGCGA CGTCATGGCC TATGCGAGCT TCTCGAAGGG CTTCAAGGGC
GGCGGCTTCA CGATGCGCTA CTTCCCGCCC GTCATCCCGG CGCCGGGCAC CGACCCGAAC
GACATCGTCT CCTATGCCGG CCCGGAAAAG GCGACCTCCT ACGAGGTCGG CCTGAAGACC
GAGCTGTTCG ATCGCCGCCT GCGCTTCAAC GTCGCGGCCT TCTACACCGA CTACAAGGAC
ATCCAGGTCA CCTACAACAT CGACCCGGAC GGCCCCGGCC CGATCGGCAA TTTCGTGCCG
GTGCTCGCCA ACGCCGCCTC GGCGAAGATC AAGGGCGTCG AGGTCGAGGC GTCGGCCCGG
CTCGCCGACT GGCTGCGGCT CGACGGCAGC CTCGGCTATA CCGATGCCGA CTATAAGGGC
TTCTCGGCCC AGGCGCTGGC CAACTATCCG ACGGCGGGCA GCTTCCGGGT GCCGAACACG
CCCAAATGGA CGGCGAACAT CGGCGGCACC GCGACGCTGT TCGACAGCGA CGACAAGGGC
ACCGCGCTGG TCCGCGTCGA CTATGCGTAC CGCAGCAGCC AGTTCAAGGA GTTCAGCAAC
GATCCGACGC TGTTCCAGAA GGGCTTCGGA CTGCTCAACG CCAGCCTGAC CTACAAGCTG
CCGGGCGACC ATATCGAGCT GTCGGCCGGC GCCACCAACA TCACCGACAA GACCTATATC
GTCAGCGGCG TCTCCAACAC CGGCATCGGC TATACCCAGG CGACCGTCTC GCGGCCGCGC
GAATGGTTCG TCCGCGCCAA ATATCGCCTC TGA
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| Protein sequence | MKRGIGILSA SAATLAVFAP GAGHAQDAAG PVVASGLEEI TVTARRRAEN IQSAPLSVSA
FSSAALEERN VQSSSDITSF VPNVQFDSAA SESGGGASSQ ISIRGIGQTD YVLTVEPAVG
VYLDGVYIGK SMGSLLDAVD IDRLEVLRGP QGTLFGKNTI GGAIQLISKR PTDTLEGYGE
LTSGSYSRFD AKGAISGPLS DTVRARLSGA YQSRHGFVKR VTETGQDTGD RQGNVDRLSG
RLAIEADLTS SLTATLTFDG TRIREQSPGQ ILVKADEGAA FSGAYNAGVP GGVCLPGAGA
SRFANPYCYN SQWVRPLKSL ETTNSGPNYA DTDVYGAGLN LEWKLGGATL KSITAWRKVK
VDIAQDITGS PHYLNFIEQH IKTEQFSQEF QLLGDLADDK LHYVLGLYYL HESGTQLFPV
QLTLVQFLSG GKIRNDSYAG FGQVTYDLTD QFSITGGLRY SDETRRFNPG VQVLQGYAAQ
TDVPGFVNLF AGAVGPAGTP LFPAGWYSRG SKSTTPMVSA NYKFNRDVMA YASFSKGFKG
GGFTMRYFPP VIPAPGTDPN DIVSYAGPEK ATSYEVGLKT ELFDRRLRFN VAAFYTDYKD
IQVTYNIDPD GPGPIGNFVP VLANAASAKI KGVEVEASAR LADWLRLDGS LGYTDADYKG
FSAQALANYP TAGSFRVPNT PKWTANIGGT ATLFDSDDKG TALVRVDYAY RSSQFKEFSN
DPTLFQKGFG LLNASLTYKL PGDHIELSAG ATNITDKTYI VSGVSNTGIG YTQATVSRPR
EWFVRAKYRL
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