| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0723 |
|---|
| Symbol | |
|---|
| ID | 5198319 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 800615 |
|---|
| End bp | 801058 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640580267 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001261228 |
|---|
| Protein GI | 148553646 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02096] conserved hypothetical protein, steroid delta-isomerase-related
[TIGR02246] conserved hypothetical protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00486014 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTGACCG AAGCCATTTT CGACGACCTG GAACAGGCCT GGAGCGACAA GGACATCGAC
CGGCTGGTGT CGCTGTTCAC GCCCGACTGC ATCTATGAGG ACCTGGCGCT GGGCGCCCGC
CACGAGGGCC ATGCCGGGGT GCGCGAGTTC GCCGAGGGCG TGTTCGCGAC GATGCCCGAC
TTCACCCTGC GCTTCCCGGT GCGGCTGGTG ACGCCCGAAC GCGGATCGAG CCATTGGACG
ATCAGCGCCC ATTGGAACGG CCCGTTCGAG GGCGTCGACC GGACCGGCCA CCCGATCGAG
TTCCACGGCC TGTCCTCCTA CGTCTTCCGC GACGGCCGCA TCGCCCACAA TATCGACTGC
TGGGACTATG TGGCGATGAT CAAGGCGTTC GGGGTGCTGC CGCTCGGCCT CGCCGCGCTG
CCCACCGCCG AATCGGCCTC GTAA
|
|---|
| Protein sequence | MLTEAIFDDL EQAWSDKDID RLVSLFTPDC IYEDLALGAR HEGHAGVREF AEGVFATMPD
FTLRFPVRLV TPERGSSHWT ISAHWNGPFE GVDRTGHPIE FHGLSSYVFR DGRIAHNIDC
WDYVAMIKAF GVLPLGLAAL PTAESAS
|
|---|
| |