| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0722 |
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| Symbol | |
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| ID | 5198318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 799413 |
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| End bp | 800489 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640580266 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001261227 |
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| Protein GI | 148553645 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00564708 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTGGAT TTGGACCGGT CTTGCAGGAG ATGGCTGTCG ATCAGCGCTT CCTCGCGAAC
GCCGCCGCGC CGGCCCTGGA GAGCGTCCAT CGGCACAGTT TCGCCAGCCT GCGCCCGGCC
GACGCGCTGG ACAGCGTCAC CCGCGTCTTC TTCCCGCATG AGGTCGTCGT CCGCAGCAAC
GACAAGCATC TCGACTTCAA CCATTGCTCG GCCTCGCTCG GCGACATCAG CCTGAACCAG
ATCGCCTATG GCGCCGACGT CGACGTGCTG ATCACGCAGT TGCAGCGGAC GCATTTCGTC
TTCGTCGTCG CGCTGACCGG CGAGGCGGTG GTCGAGTTCA ACCAGCAGAG CTGGGCGTTC
CGCAGCGGCG ACAGCGTACT GCTGTCGCCC AGCGTCCGCT ACAATTTCCA GATGGGGCAG
GACCATACCC ATCTCGCGAT CGGCATCCCG TGCAGCCGGC TGATCGGCAG CGGCCGTCCC
TATGAGGCGG TCCACAACGT CGTCGAGCGC GCGGCGGACG CCCCCAATGG CGGGGCCGCC
AGCCTGATGG GGTTCATCGA ATATCTCTGT ACCGAGCTGC ATCGCGGATC GCCGATCTTC
GGCATGCAGG ACGTCGTCGC CGCGAACGAG AACAGCTTCC TGGCGATGAT ACGCGCGGCC
CTGTTCGACC GCGAGATGCC GGTGCGGCAG GCGGCGGTGC TGCCGGTCTT CGTCCGCCGC
GCCGAGCAGT TCATCGCCCG GCATCTGAAG GACGACATCC AGCTCAGCGA CATCGTCGAG
GCGGCGGGCG TCCCGGCGCG GACGCTCTAT CACGGCTTCG AGCGCTTCAT GGGCCATAGC
CCGATGCGCT GGCTGCGGCT GCGCCGGCTG GAAAGCGCGC GCGCCGACAT CATCGCCAGC
GACGGCGAGA TTTCGGTGAC CGCGCTCGCC AACCAGTACT GGATCGGCCA TGGCGGCCGC
TTCGCCAACA TGTACCGCGA GATCTATGGC GAGCCGCCGT CGGCGACGCT CGGCCGCGCG
CGGGCGACGG CGCTGCGCGC GATGACCGGG CCCAAGGTTG CGCAACGCGT ACAATGA
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| Protein sequence | MSGFGPVLQE MAVDQRFLAN AAAPALESVH RHSFASLRPA DALDSVTRVF FPHEVVVRSN
DKHLDFNHCS ASLGDISLNQ IAYGADVDVL ITQLQRTHFV FVVALTGEAV VEFNQQSWAF
RSGDSVLLSP SVRYNFQMGQ DHTHLAIGIP CSRLIGSGRP YEAVHNVVER AADAPNGGAA
SLMGFIEYLC TELHRGSPIF GMQDVVAANE NSFLAMIRAA LFDREMPVRQ AAVLPVFVRR
AEQFIARHLK DDIQLSDIVE AAGVPARTLY HGFERFMGHS PMRWLRLRRL ESARADIIAS
DGEISVTALA NQYWIGHGGR FANMYREIYG EPPSATLGRA RATALRAMTG PKVAQRVQ
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